Methylocapsa sp. D3K7: QEV83_17845
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Entry
QEV83_17845 CDS
T08996
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
medk
Methylocapsa sp. D3K7
Pathway
medk03420
Nucleotide excision repair
medk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
medk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QEV83_17845
03430 Mismatch repair
QEV83_17845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
medk03400
]
QEV83_17845
Enzymes [BR:
medk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QEV83_17845
DNA repair and recombination proteins [BR:
medk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QEV83_17845
MMR (mismatch excision repair)
Other MMR factors
QEV83_17845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
AAA_11
PcrA_UvrD_tudor
DUF3553
Motif
Other DBs
NCBI-ProteinID:
WGJ14465
LinkDB
All DBs
Position
complement(3804221..3806563)
Genome browser
AA seq
780 aa
AA seq
DB search
MTDVLSLAALDPPVQGIAARARAGGSRYFDGLNAKQREAIEAIDGPLLVLAGAGTGKTRV
LTTRIAHIIAQGRARAHEILAVTFTNKAAREMKERIAVLAGPVAEGMPWLGTFHAISTKI
LRRHAELVGLKPGFTILDTDDQIRLLKQVLQAENVDDKRWPARALAHQIDAWKNRGLDVA
HVPAGEAAAFADGKGAALYKLYQERLKILNAADFGDLLLETLRLLRENPEVLKLYQDRFR
YMLVDEYQDTNTAQYLWLRLLAQGRHNVCCVGDDDQSIYGWRGAEVDNILRFESDFPGAK
IIRLERNYRSTGHILAVAAGLIAHNEGRLGKTLFTDGADGEKPTVTGVWDSEEEARVIGE
EIEQLQRKGHALDEVAILVRASFQMREFEERFITLGLPYRVIGGPRFYERAEIRDALAYL
RCVAQPADDLAFERIYNLPKRGLGDATLQLLHDHARSARIPLMQAAWSMVETEDLKPKQR
QTLRSLLADFSRWSELIDDKPQGELAEMILEESGYTDMWRKEKTADAGGRLENLKELVRS
MEEFPDLGSFLEHISLVMDAANTDSGARVSIMTLHAAKGLEFETVFLPGFEEGLFPHQRS
LDDQGRAGLEEERRLAYVGLTRAKRRAKIYFATNRRIHGLWQTTIPSRFLDELPAAHVEV
VEAATGAAYGGYAQSRFANMDSYGSSYTTPGWQRAQRRGEEMKRDTRSGFRDSRARRGPL
QIEGELVASSSAGSTYAKGARVFHTKFGGGTVASVDGNKLTIDFDKAGRKMVLESFVRAG
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgatgtcctttcgctcgctgccctcgatcctcccgtgcaggggatcgctgcccgc
gcgcgggcgggcggctcccgctatttcgacgggctgaacgccaagcagcgggaagccatc
gaggcgatcgacgggccgctgctcgtgctggcgggcgcgggtaccgggaaaacccgcgtt
ctcaccacccgcattgcgcatattatcgcgcaaggccgcgcccgcgcgcatgaaatactt
gccgtgaccttcaccaataaggcggcgcgggaaatgaaggagcgaatcgcggtgctcgcc
gggccggtcgccgagggcatgccgtggctcggcacgttccacgcgatttcgacaaagatt
ttgcgccgccatgccgagcttgtcggtctgaagcccggcttcaccattctcgacacggac
gatcagattcggctgctcaaacaagttctgcaagccgaaaatgtcgacgacaagcgctgg
cctgcccgcgccctcgcgcatcagatcgatgcctggaaaaatcgcggcctcgacgtcgca
catgtgcccgcgggcgaggctgcggcgttcgccgatggcaaaggcgcggcgctctataag
ctctatcaggagcgcttgaaaattctcaacgccgccgatttcggcgatcttctgctcgaa
accttgcggctcctgcgcgaaaatccggaggtcttgaaactctatcaagaccgcttccgc
tacatgctcgtggacgaataccaggacaccaacacggcgcaatatttgtggctgcggctg
ctggcgcaagggcgccacaatgtctgttgcgttggcgatgacgaccagtcgatctatggc
tggcggggcgccgaggtcgataatattttgcgcttcgagagcgattttccaggcgcgaaa
atcattaggctcgagcgcaattaccgctcgaccggacatatcctcgctgtcgcggcaggt
cttatcgcgcacaatgaagggcggctgggaaaaacgctgttcaccgatggtgccgatggc
gaaaagccgaccgtcaccggcgtttgggattcggaagaagaagcccgcgtcatcggcgaa
gagatcgagcaattgcagcgcaagggtcacgcgctggatgaggtggcgatcctagtccgc
gcctcgttccagatgcgcgaatttgaggaacgcttcatcacgctcggcctgccctaccgg
gtgatcggcggcccgcgcttttatgagcgcgccgagatccgcgatgcgctggcgtatctg
cgttgtgtcgcgcagcctgccgatgatctcgcgtttgagcgcatctacaatctgccgaaa
cgcggcctcggcgatgcgaccctgcagctgctccatgatcatgcgcggagcgcgcgtata
cccttgatgcaagcggcgtggagcatggtcgagaccgaagacttaaagccgaagcagcgg
cagaccttgcgcagcctcctcgcagatttttctcgctggtctgagttgattgacgacaag
ccgcagggcgaactcgccgagatgattttggaagagtccggctacaccgacatgtggcgg
aaggaaaagaccgccgatgccggaggccgtcttgaaaatctgaaggagctcgtccgctcg
atggaggagtttcctgatcttggcagcttcctcgaacatatctcgctggtaatggacgcc
gcgaataccgactccggcgcacgcgtgtcgatcatgaccttgcatgcggcgaagggcctt
gagttcgagaccgtgttcctgccgggttttgaggaaggcctgttcccgcatcagcgttcg
ctcgacgatcagggccgcgccgggctggaggaagagcgccgcctcgcctatgtcggccta
acgcgggccaagcgccgtgcaaagatttatttcgcgaccaaccggcgcattcatggcctg
tggcagacgacgattccctcacggtttttggatgaactgcctgcggcgcatgtcgaggtc
gtcgaggcggcgacgggtgcagcctatggcggctatgcgcaatcgcgcttcgccaacatg
gacagctatggctcgtcctacacgacgcccggctggcagcgcgcgcaacggcgtggcgag
gagatgaagcgggacacgcgaagcggttttcgagacagccgggcgcggcgcggcccactg
cagatcgagggagagcttgtggcaagttcgagcgccggttcaacctatgcgaaaggcgcg
cgggtgtttcacacgaaatttggtggcggcacggtggcgagcgtcgacggcaataagctc
accattgatttcgacaaggctggccgcaagatggttctggagagttttgtccgggcgggc
tga
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integrated database retrieval system
