Mycoplasmopsis edwardii: NCTC10132_00968
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Entry
NCTC10132_00968 CDS
T07092
Symbol
MCYN0336
Name
(GenBank) Holliday junction ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
medw
Mycoplasmopsis edwardii
Pathway
medw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
medw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NCTC10132_00968 (MCYN0336)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
medw03400
]
NCTC10132_00968 (MCYN0336)
Enzymes [BR:
medw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC10132_00968 (MCYN0336)
DNA repair and recombination proteins [BR:
medw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NCTC10132_00968 (MCYN0336)
RecFOR pathway proteins
NCTC10132_00968 (MCYN0336)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
RuvB_C
AAA
AAA_lid_4
AAA_5
AAA_16
DUF815
RNA_helicase
AAA_14
TIP49
AAA_22
Bac_DnaA
nSTAND3
Rad17
TniB
NPHP3_N
TsaE
AAA_3
AAA_2
AAA_7
NB-ARC
NTPase_1
Torsin
AAA_19
Motif
Other DBs
NCBI-ProteinID:
SYV97602
UniProt:
A0A3B0PLD1
LinkDB
All DBs
Position
1:complement(577737..578696)
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AA seq
319 aa
AA seq
DB search
MQHSELRPSNFNDFIGQKNLIKTLKAMMQSSSQQNKTLSHLLFYGSPGMGKTTLVTLIGN
ELGKKVHFIQGANIEKKSDLINVLSVINQGDIVFIDEIHSINKGVIEFLYGAMEDFVFDL
IIGVEGNSRAMRMKIKEFTLIGATTKLNEIAQPLKDRFGYIARLIGYNEDEIAKILTNTA
KRLKIVLDDSCIRQIVSYSRKTPRIANHLLQRVNDFAISLNHGIISPQIIKKTFKYMDLY
EFGLTKDHIEYLYILKESFYEKYASLLTITGLVSFSKETILLEIEPILIYYGLIEKTSRG
RRISSKGIDYLIRQKVTVK
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgcaacattcagaacttagaccctctaattttaatgattttatagggcaaaaaaattta
atcaaaaccttaaaagcaatgatgcaaagttcatcacaacaaaataaaacattatcacat
ttattattttatggatcacctggaatgggaaaaacaactttagtaacattaataggaaat
gaattaggcaaaaaagtacattttattcaaggtgcaaatattgaaaagaagagtgattta
attaatgttttatcagttatcaatcaaggcgatattgtttttattgacgagattcatagt
attaataaaggagttatagaattcctttatggagcaatggaagattttgtttttgactta
attataggtgtagaaggtaattctagagctatgagaatgaaaattaaagagtttacttta
attggtgcaacaacaaagttaaatgaaattgcacaaccactaaaagatcgttttggatat
attgctagattgattggttataatgaagatgaaatcgcaaaaatactaacaaatacagct
aaaaggttaaaaattgtattagatgattcatgtataaggcaaattgttagttattctaga
aaaactcctagaatagcaaaccatttattgcaaagagttaatgactttgctattagttta
aatcacggaattattagtccgcaaatcattaaaaaaacttttaagtatatggatttatat
gaatttggattaactaaagatcacattgaatatctatatattcttaaagagagtttttat
gaaaagtatgcttcattattaacgattacagggcttgtgagtttttcgaaagagactata
cttttggaaattgaaccaatacttatttactatggtttaattgaaaaaacttcaagagga
agaaggatttcttcaaaaggaattgactatttaattaggcaaaaagtgaccgttaaataa
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