Mycoplasmopsis edwardii: NCTC10132_01353
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Entry
NCTC10132_01353 CDS
T07092
Symbol
ligA_1
Name
(GenBank) DNA ligase (NAD(+))
KO
K10754
replication factor C subunit 1
Organism
medw
Mycoplasmopsis edwardii
Pathway
medw03030
DNA replication
medw03410
Base excision repair
medw03420
Nucleotide excision repair
medw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
medw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC10132_01353 (ligA_1)
03410 Base excision repair
NCTC10132_01353 (ligA_1)
03420 Nucleotide excision repair
NCTC10132_01353 (ligA_1)
03430 Mismatch repair
NCTC10132_01353 (ligA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
medw03032
]
NCTC10132_01353 (ligA_1)
03400 DNA repair and recombination proteins [BR:
medw03400
]
NCTC10132_01353 (ligA_1)
DNA replication proteins [BR:
medw03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
NCTC10132_01353 (ligA_1)
DNA repair and recombination proteins [BR:
medw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
NCTC10132_01353 (ligA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
HHH_2
DNA_ligase_OB
BRCT_2
DNA_ligase_ZBD
PTCB-BRCT
HHH_5
RavZ_C
zf-C2H2_9
DUF7786
CAMSAP_CKK
Motif
Other DBs
NCBI-ProteinID:
SYV97981
UniProt:
A0A3B0QEF9
LinkDB
All DBs
Position
1:complement(799308..800246)
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AA seq
312 aa
AA seq
DB search
MHNAEFIKDLNINIGDEITLIKSGEIIPKITGLKTKNSDDYYHKILNCPSCESKLENIDN
LVDQFCLNESCNEKRIRKLIHFASKKALNIETLAEKNIALFYQQGMLSDFASIYNLNKFK
DQILELEGFKDARINKILISIEESRKTKFLNVLYAVGIKHVGLRVAEIISDYVNSFKELL
NLNLDDLLNINTIGESILSEIKLYLANNKDDLLKLDEIFEYEEKLNNNEVQVLNNLTFVI
TGKLEKPRSQYEELIKMYGGKLASSVSKNVNYLITNNNVSNTSKMVSAVKLGVKVISETE
FNELVNELIKKA
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
ttgcataatgctgagtttattaaagatttaaacattaatattggagatgaaatcacttta
attaagtctggtgaaatcatccctaaaattactggattaaaaacaaagaattctgatgat
tattatcacaaaattcttaattgtcctagttgcgaaagtaaacttgaaaatatcgataac
ctagtggaccaattttgtttaaatgaatcatgtaatgaaaaacgtattagaaaactcatt
cactttgctagcaaaaaagcccttaatattgaaacactagctgaaaaaaatattgcgtta
ttttatcaacaaggaatgttaagtgattttgcttcaatttataacttaaataaatttaaa
gatcaaatacttgaattagagggatttaaggatgcaagaattaataaaatccttatttca
attgaagaatctagaaaaacaaaattccttaatgttttatacgctgttggtattaaacat
gtaggtttaagagtggctgaaataatttctgattatgttaattcatttaaagagttactc
aatttaaaccttgatgatcttcttaatattaatacaattggtgaatctattcttagtgaa
attaaattgtatttagctaataataaagatgatttattaaagctcgatgaaatatttgaa
tatgaagaaaaattaaataataatgaagtacaagtcttgaataatttaacttttgttatt
actggtaagttagaaaaaccaagaagtcagtatgaagaacttattaaaatgtatggcggt
aaacttgcttcaagtgtatctaaaaatgtaaattatttaataacaaacaataatgtatcc
aatacttctaaaatggttagcgctgttaaactaggtgttaaagttattagcgaaacagaa
tttaacgaactagttaatgaattaattaaaaaagcataa
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