Methylophilus sp. DW102: MTDW_00310
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Entry
MTDW_00310 CDS
T10702
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
medz Methylophilus sp. DW102
Pathway
medz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
medz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MTDW_00310 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
medz03019
]
MTDW_00310 (recQ)
03400 DNA repair and recombination proteins [BR:
medz03400
]
MTDW_00310 (recQ)
Enzymes [BR:
medz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MTDW_00310 (recQ)
Messenger RNA biogenesis [BR:
medz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MTDW_00310 (recQ)
DNA repair and recombination proteins [BR:
medz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MTDW_00310 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
BEV06731
LinkDB
All DBs
Position
31547..33373
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AA seq
608 aa
AA seq
DB search
MASLSPQQILQDVFGYNQFRHQQQAIVEHVISGKDALVLMPTGGGKSLCYQIPALARDGL
AIVVSPLIALMQDQVEALQQLGVNAAFLNSSLSAEDNARITRQVISGEIKLLYVAPERLM
VGSFLSLLDEVQQHTGLALFAIDEAHCVSQWGHDFRPEYRQLTVLHNRFPDVPRIALTAT
ADAPTRAEIISQLNLENARQFVSSFDRPNIRYHVGIKNNARQQLQAFLEREHANDAGIIY
CLSRKKVEETAAWLVEKGWSALPYHAGLPAQLRELHQRRFLREEGIIMVATIAFGMGIDK
PNVRFVAHLDLPKSMEGYYQETGRAGRDGLQANAWMVYGMGDVVSMRQMLDSGEASEERK
RLERLKLDALLGYCESTTCRHQSILRYFGESHPGACGQCDNCLHPVETWQATQVAQMALS
CVYRTGQRFGVGHLIDVLIGKVTPQVERFGHEKVSTFGIGKTLNQNQWSGVYRQLIAAGL
LEADMAAYGGLKLTEAARPVLKGEQEVWLRRDAEPEKRMSKAERSARAKEAFEGANDDPL
WQALKAKRLELAREQGVPPYVIFHDSTLLEIHNRKPQTLTEMGQISGIGQAKLQKYGDAF
LQVLEEMA
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcctctcaccgcaacaaatcctccaagacgttttcggttacaaccagtttcgc
caccagcaacaagccatcgtagaacatgtcatcagcgggaaggatgcgctggtgctcatg
cccaccggtggtggcaaatcgctttgttatcaaattccagccttggcgcgtgatggcctg
gccattgttgtctcgcccttaattgcgctgatgcaagaccaggtcgaagccctgcaacaa
cttggcgtcaacgcagcatttctgaattcgagtttaagcgcagaagataatgcccgcatc
acccgccaggtgatcagcggtgaaatcaaattactctacgtcgcccccgagcggctgatg
gtcggcagctttttgagcctgctcgatgaagtgcagcagcacaccggcctcgccctgttt
gccattgatgaagcacattgcgtctcgcaatgggggcatgatttccggcccgaatatcgc
cagctcaccgtactgcacaatcgctttcccgatgtgccccgtatcgcgctcaccgcaacg
gccgatgcaccaacacgtgctgaaattatcagccaattgaatctggaaaacgcccgccag
ttcgtttccagttttgataggccaaatatccgctaccacgtcggcataaaaaacaatgcc
cgccagcaattgcaggcatttttagagcgcgaacacgcgaacgatgcagggattatttac
tgtttatcgcgcaaaaaagtcgaagaaaccgccgcctggctggttgaaaaaggctggtca
gcgttgccttatcatgccgggttgcctgcgcaattacgtgagctgcatcagcgacgtttt
ttgcgtgaagaaggcatcatcatggtggcaaccatcgcgttcggcatgggcatcgataaa
cccaacgtccgctttgtcgcacatttagatttgccaaaaagcatggaaggctactaccag
gaaaccggccgcgccgggcgcgatggcctgcaagcaaatgcctggatggtctacggcatg
ggcgatgtcgtctccatgcggcaaatgctcgatagcggcgaagcctcagaagaacgaaaa
cggctggagcgcttaaaactggatgccttgctcggctactgcgaatccaccacctgccgt
caccaaagcattctgcgctacttcggcgaaagccatcctggcgcctgcggccaatgcgat
aactgcctgcacccggtagaaacctggcaagccacccaggtcgcgcaaatggcactttcc
tgcgtctaccgcaccggccaaagattcggcgtcggccatctaattgatgtgctgataggc
aaagtcacgccacaagtcgagcgctttggtcacgagaaagtcagcactttcggcataggt
aaaaccctcaatcaaaaccaatggagcggtgtctatcgccagctgattgcagccggatta
ctggaagcggatatggctgcctacggcggtttaaaactcactgaagccgcacgaccagtg
cttaaaggcgagcaagaagtctggctacgccgcgatgccgaacccgaaaaacgcatgagc
aaagccgaacgcagcgcccgcgctaaagaagcctttgaaggtgccaatgatgatccgctc
tggcaagcacttaaagctaaaaggttagaattggcaagggaacagggtgtaccaccatat
gtgatttttcacgatagtaccttgctcgaaattcataatcgcaaaccgcagacattgact
gagatggggcagattagcgggatagggcaggcgaaattgcagaaatatggggatgcattt
ttgcaggtgcttgaagaaatggcttaa
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