Methylophilus sp. DW102: MTDW_01560
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Entry
MTDW_01560 CDS
T10702
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
medz Methylophilus sp. DW102
Brite
KEGG Orthology (KO) [BR:
medz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
medz03016
]
MTDW_01560 (truB)
Enzymes [BR:
medz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MTDW_01560 (truB)
Transfer RNA biogenesis [BR:
medz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MTDW_01560 (truB)
Prokaryotic type
MTDW_01560 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
BEV06856
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All DBs
Position
188027..188926
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AA seq
299 aa
AA seq
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MQTKRIKRAVSGVLLLDKPYGFSSNQALQKVKWLYQAQKAGHTGTLDPLATGVLPICLGE
ATKFAQHLTDENKTYVATVKFGVTTTTGDKEGDVVSEVACQVSRAEIERVLPQFMGPITQ
VPPMYSALKVNGKPLYEYARNGVELERAPRQVTIHALRVLACAENSAEIEVCCSKGTYIR
TLGEDIGKALNVGAHLTALRRTATATYQIAETVTIEALEQMSIEQRDALLLPVDSAIQIL
PKVELHEDAAYYFKQGNPVWLAGVIPAGDLRIYSASGLFLGVGQQQRDGRIAPKRVVNL
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccaaacgcattaaacgtgccgtcagtggcgtgttgttgctggacaagccctat
ggcttttcatccaatcaggccctgcaaaaggtcaaatggttatatcaggcccaaaaagcc
ggacataccgggaccttggatcctcttgcaactggcgtgttgccgatctgtttgggcgaa
gccaccaaatttgcacaacacctgacggatgaaaacaaaacctatgtggcgaccgtcaag
tttggtgtgaccaccactaccggagacaaagaaggagacgtcgtcagtgaggtggcttgc
caggtgtcgcgtgcagagattgagcgcgtgttgccgcagtttatggggccaattacacaa
gtgcctcccatgtattctgcgctcaaggtaaacggtaagcctttgtatgaatacgcgcgt
aatggtgtcgagctagaacgtgcaccgcgtcaggtaaccattcatgcattgcgtgtcttg
gcctgtgctgagaatagtgcagaaatcgaagtctgttgtagcaaaggcacttatatccgt
accttaggcgaggatattggtaaagcactcaatgtgggtgcgcacctcacagctttacgc
cgtacggcaaccgccacttatcaaatcgccgagaccgtgacgatagaagctctggagcag
atgtctattgagcagcgcgatgcgttgctgctgcctgtcgatagtgccattcaaatcctg
cctaaagtcgagctgcatgaggatgccgcctattatttcaaacaaggcaatccagtctgg
ctggctggcgttatcccagcgggcgatttgcgtatttacagtgcttccggtttatttctt
ggggtcggccagcagcagcgcgatggccgtattgcccccaaacgcgtcgttaatctctag
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