Methylophilus sp. DW102: MTDW_01890
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Entry
MTDW_01890 CDS
T10702
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
medz Methylophilus sp. DW102
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
AAA
AAA_3
AAA_16
HTH_50
AAA_2
AAA_7
MCM
HTH_Tnp_ISL3
Parvo_NS1
AAA_PrkA
AAA_22
FleQ
Torsin
Motif
Other DBs
NCBI-ProteinID:
BEV06889
LinkDB
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Position
complement(220422..221795)
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AA seq
457 aa
AA seq
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MSSPQHTILAVDDEPHMRRLLEISLRQAGYKALSAGNGREALELVQQQQIDLVVSDLHMP
GMSGLQLLEALRKQFERLPFIMVTAQGEIKTAVEAMKLGASDYILRPFELETLEIAIQKA
LAINRIQLENSFFKESRQPTVTGLIGDSAPMQSLKQMIQQVAPERATVFIVGETGTGKEL
VAKALHDASPRKTELFVAVNCAAIPADILESELFGHEKGAFTGAVKERVGKFELANGGTL
FLDEITEMPIQLQSKLLRVLQENVVEKLGGNRQIALDVRVVAATNRDPMQAVKEGKLRED
LYYRLNVIQLQVPPLRERGEDVGLLAAYFLAKRHGQLSESARLCLHQYRWPGNVRELENI
LERAAILAGSQTIQPQHLPADIAQSPGLGPASSTANLDTSATSVENDLSIPRATEAIERR
LILKALEACQGNKTKAAKQLEISERSLWNKLNQYGLR
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtccacaacacaccattttagccgttgacgatgaaccccacatgcgcaggctg
ctcgaaatcagcttgcggcaagccggctacaaagcgctttcggcaggcaacggccgcgaa
gcgctcgagcttgtccagcaacagcagattgacttggtcgtgagcgacctgcatatgccg
ggcatgagcggtttgcagttgcttgaggccttgcgcaagcaatttgagcgcctgccattc
atcatggtcaccgcccagggcgaaatcaaaaccgccgtcgaagccatgaagctgggcgcc
agtgattatattttgcgtccctttgagctcgaaacattggaaatcgcgattcagaaggca
ctggcaatcaaccggattcaactggaaaactcgtttttcaaggagagcagacaacccacg
gtcaccggcctcatcggcgatagcgcgcccatgcagtcgctgaaacaaatgatccagcaa
gtggcgccggaaagagccactgtgtttattgtgggtgaaaccggtaccggcaaagagctg
gtcgctaaagccctgcatgatgcttcgcccagaaaaaccgaattgtttgttgcggtgaac
tgcgcagcgatcccggcagacattcttgagtcagaattatttggtcatgaaaaaggcgca
tttaccggggcggtgaaagagcgtgtcggcaagtttgagctggccaatggcggcacgctg
tttctggatgaaatcaccgaaatgccgattcaactgcagtcgaaactgttgcgcgtattg
caggagaatgtggtggaaaaactgggcggcaaccgccaaatcgcgcttgatgtgcgcgtg
gtggcggcgaccaaccgcgaccccatgcaagccgtcaaagaaggcaaactgcgcgaggat
ttgtattaccggctcaacgtgattcaactgcaagtgccgccattgcgcgagcggggagaa
gatgtcggcttgctggcagcgtattttttggctaaacgccacggccagctcagcgaaagc
gcacgcctgtgtttgcatcaatatcgctggccgggcaatgtccgtgagctggaaaatatt
ctggagcgcgccgcgattctggcaggcagccaaaccatccagccccagcacttaccggcg
gacattgcgcaatcgcccggccttggcccggcttcgtctaccgccaatctagacacgtcc
gcgacatcggtagaaaatgacctctcgattccgcgtgccacggaagccattgaacgccgc
ttaattctcaaggcacttgaagcctgccagggcaacaaaaccaaagccgccaagcagtta
gagattagcgagcgctcactgtggaacaaactgaaccagtacggcctgcgttaa
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