Methylophilus sp. DW102: MTDW_03100
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Entry
MTDW_03100 CDS
T10702
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
medz Methylophilus sp. DW102
Brite
KEGG Orthology (KO) [BR:
medz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
medz03036
]
MTDW_03100 (xerD)
Chromosome and associated proteins [BR:
medz03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
MTDW_03100 (xerD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Phage_int_SAM_5
DUF3435
Motif
Other DBs
NCBI-ProteinID:
BEV07010
LinkDB
All DBs
Position
342942..343859
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AA seq
305 aa
AA seq
DB search
MQQKAHSLTEAAAFPEIDPFIDQLWLEDGLSPNTLSSYRNDLKGFSEWCRQHTHTLWEVQ
SHDVQAYLAHRFPQVKVRSINRLIATLRRFYRYALAANLIQQDPTLHIEAPKMPRSLPKT
LSESQVEDLLNAPDVNAPLGMRDRAMLELLYASGLRVSELVNIKISEVSTQDGVVRVTGK
GSKTRLVPMGQEAAEWIDRYLAGARAEILKGSLSDAVFVTTRGDAMTRHAFWHIIQRYAL
QAGISQHISPHVLRHAFATHLLNHGADLRVVQMLLGHADISTTQIYTHVARERLQQLHKV
HHPRG
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaaaaagcgcattctttgaccgaggcggcagcatttcctgaaatcgatcccttt
atcgatcagctctggctggaagatggcttgtcgccgaataccttatccagctaccgcaac
gatttaaaaggtttttccgagtggtgcaggcagcacacccatactttgtgggaggtgcag
tcgcatgatgtgcaagcatatcttgcccatcgtttcccgcaagtgaaggtgcggagtatt
aaccgcctgatagccaccttgcgccgtttttaccggtacgcgctggccgccaatctgatt
cagcaagaccctaccttgcatatcgaagcgcccaaaatgcctaggtcactgccaaaaacg
ctgagtgagtcgcaggtggaagatttgctcaatgccccggatgtgaacgcgccgcttggt
atgcgagaccgagccatgcttgagctgctctatgccagcggattgcgtgtctcagagctg
gtaaatatcaaaatcagcgaggtcagtacgcaagatggcgtggtgcgcgtcaccggtaaa
ggcagcaaaacgcgcctggtgcccatgggccaggaagcggccgagtggatagaccgttac
ttggcaggcgcccgcgcggagattttaaaaggcagtctgagtgatgcggtgtttgtcacc
acacgtggcgatgccatgacgcggcatgccttttggcacattattcagcggtatgccttg
caggcggggatttctcagcatatcagcccgcatgtgttacgccatgcgtttgctacgcat
ttgctcaatcatggcgcggatttacgcgtagtgcagatgttgctgggacatgcagatatt
tcgaccacgcagatttatacgcatgtggcgagggagcggttgcagcagctgcataaggtg
catcacccgagggggtag
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