Methylophilus sp. DW102: MTDW_09430
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Entry
MTDW_09430 CDS
T10702
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
medz Methylophilus sp. DW102
Pathway
medz00541
Biosynthesis of various nucleotide sugars
medz01100
Metabolic pathways
medz01250
Biosynthesis of nucleotide sugars
Module
medz_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
medz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
MTDW_09430 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
medz01005
]
MTDW_09430 (rfaD)
Enzymes [BR:
medz01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
MTDW_09430 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
medz01005
]
Core region
MTDW_09430 (rfaD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
KR
Polysacc_synt_2
Ldh_1_N
Shikimate_DH
Glu_dehyd_C
Motif
Other DBs
NCBI-ProteinID:
BEV07643
LinkDB
All DBs
Position
complement(1036545..1037534)
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AA seq
329 aa
AA seq
DB search
MIIITGGAGMIGSIMAWHLNNKLGRQDLVIVDRITHENQWQNLVHRHYAEYLDKDQLFEF
LEENDEITAVIHMGAISATTERDFNKLVADNMHYSQDLWSWCAEYEVPFFYASSAATYGG
GEQGYDDTSIENLRPLNGYGYSKHFFDQWVLQQVAQKQPTPPAWAGFKFFNVYGPNEYHK
ERMASVAYHTFNQFSETGTMRLFKGTKEGIEDGMQLRDFVYVKDVADVMGFFLESALKNK
PVASAIYNIGTGQARSFKDLATNVMTSMRREPNITYIDMPQDLQGKYQYFTQAEMKKLRD
AGYKKPFTSLEEGVKDYVQNYLMQDDPYA
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgatcattatcaccggtggtgcaggcatgattggttctatcatggcctggcatttaaac
aacaaactgggtcggcaagacttggtgattgttgaccgtatcacgcatgaaaaccagtgg
caaaacctggtacacagacactatgccgaatacctggataaagaccagctgtttgagttt
ctcgaagagaatgatgagatcacggcagtgattcatatgggggcgatcagcgcaaccacc
gagcgtgactttaacaagctggtggcggataacatgcattattcgcaagacttgtggtcc
tggtgtgccgagtatgaggtgccgtttttctacgccagctctgcggccacgtatggcggt
ggtgaacaaggctatgacgataccagcattgagaacttgcggccattaaacggctatggc
tactccaagcacttttttgaccagtgggtgttgcagcaagtcgcacaaaagcaacctacc
ccgcccgcctgggctggattcaagttttttaacgtctacgggccgaatgaatatcacaaa
gagcgcatggccagcgtggcgtatcacacgtttaaccagtttagcgagaccgggaccatg
cgcctgtttaaaggcaccaaagaaggcatagaggacggcatgcagttgcgtgactttgtc
tatgtcaaagacgtggcggatgtgatgggctttttcctggaatcagccctcaaaaacaaa
ccggttgctagcgcgatttacaacataggcaccggtcaggcacgcagctttaaagacctg
gcgaccaacgtgatgaccagtatgcgccgagagcccaacatcacttatattgatatgccg
caagacctgcagggcaaatatcagtactttacccaagcagagatgaagaagctgcgcgat
gcgggatataaaaagccgtttacctcgctggaggaaggcgtcaaagactatgtgcaaaac
tatttgatgcaagacgacccttacgcataa
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