Methylophilus sp. DW102: MTDW_15200
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Entry
MTDW_15200 CDS
T10702
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
medz Methylophilus sp. DW102
Pathway
medz03030
DNA replication
medz03430
Mismatch repair
medz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
medz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MTDW_15200 (dnaE)
03430 Mismatch repair
MTDW_15200 (dnaE)
03440 Homologous recombination
MTDW_15200 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
medz03032
]
MTDW_15200 (dnaE)
03400 DNA repair and recombination proteins [BR:
medz03400
]
MTDW_15200 (dnaE)
Enzymes [BR:
medz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MTDW_15200 (dnaE)
DNA replication proteins [BR:
medz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MTDW_15200 (dnaE)
DNA repair and recombination proteins [BR:
medz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MTDW_15200 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
BEV08220
LinkDB
All DBs
Position
complement(1693604..1697083)
Genome browser
AA seq
1159 aa
AA seq
DB search
MEAPETPSLQPAFIHLRCHSEYSIVDGTVRIDDYVKAAKSDAMPAIALTDLANLFGAIKF
YKAARGKGLKPILGCDVWIENPLQRDQPHRLLLLVQTQQGYRNLCELLSRAYLENQYRER
AEIKPEWLQQKNAGLLLLSGFTAGDIGQALQAGNQAQALQAAAHWAGVFEGRYYLEVQRV
HVPGNTEAYAQEQLIRQTIAIAQQLDLPVVATHPIQFQTPDDFMAHEARTCIAEGYVLAD
TRRPKRFVATQYVKTQAEMQALFADMPIALQNSVEIAKRCNLTLTLGKNYLPDFPTPNGE
SLDQYLVDQSKAGLEHRLAYLYPDEQLREAKRAEYEARLQFECGIIIQMGFPGYFLIVAD
FINWAKNNGVPVGPGRGSGAGSLVAYSLGITDLDPLKYNLLFERFLNPERVSMPDFDIDF
CQEGRDRVIDYVKHKYGLASVSQIATFGTMAAKAVIRDVGRVLDLPFNFVDGIAKLIPME
LGITLESALEKEPQLQERREKEEEVAELLSLALRLEGLVRNIGMHAGGVLIAPGKISDFS
PVYCQPNGDSLVSQYDKDDVEAVGLVKFDFLGLRTLTILNMALENANAQRAQETLPPLSF
ETIPLDDKRSYHLLKTANTTAVFQLESRGMKDMLKQAKPDLFEDIIALVALYRPGPMDLI
PDFCRRKHGTQRVEYPHPSTESILKETYGIAVYQEQVMQIAQVVAGYSLGGADLLRRAMG
KKKPEEMVKQREIFNEGALKNGLTLQQSNDLFDLLEKFAGYGFNKSHAAAYALVAYHTAY
LKAHYPAAFLAATMSADMNNTDNVHTFFDDCGANHIEVLPPDINASVYHFKPLNAQQVLY
GLGAIKGTGLAAIELIMASRQSQGPFKDLFDFCQRLDLRKVNRRVIESLIRAGAFDKLEP
NRAALLAGLDRAISVAEQGAAHAGQDCLFGGVIETQHALPDIAAWSPEQALQEEKTALGF
YLSGHPYLSYKAQLGPFIKGNLGELAPQEQPKLLAGVVMGVRVRMTQRGKMAIVTLDDAV
GRVDVVVGSELLNQHAQWIKEDQLLVVEGRISNDEFSGGIRVSARKLYDLAAVRNRFAQM
LTLSCNGTSDVQRLMTVLTPYRYAGEEQKRCPIKVDYHNQSAQVSLMLGDDWQVVLHDDL
LHNLQGWLSKENVKILYNA
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgcctgaaacaccctctctccaacctgcatttattcacctgcgttgccacagt
gagtattccattgtggatggcacggtgcgcattgatgattacgtcaaggctgcaaaaagt
gatgccatgccagcgattgcgctgaccgatctggctaacctgtttggggcgatcaagttt
tacaaggctgcccgtggcaaggggctcaaaccgattctgggctgtgatgtctggatcgag
aatccgctccagcgcgaccagcctcaccgcttgctgttactggtacaaacgcagcagggc
tatcgcaatctgtgtgaattactcagtcgcgcctatctggagaaccagtaccgtgaacgg
gcagaaatcaaacccgagtggttacagcaaaaaaacgcagggctattgctgctgtcgggc
tttactgccggtgacattggacaggcactgcaggctggcaaccaggctcaagccttgcaa
gcggcagcacactgggccggggtatttgaaggccgctactacctggaagttcagcgcgta
catgtgcccggcaataccgaagcctatgcccaagagcaattgatcagacaaaccatcgcc
attgcacagcagctcgatttacctgtggtggcaacgcatccgatccagttccagacgccg
gatgactttatggcgcacgaggcgcgcacctgtatcgcggaaggctatgtgctggccgat
acccgtagacccaagcgttttgtcgccacccagtatgtgaaaacccaggcagaaatgcag
gctttgttcgccgatatgcccatcgccttgcaaaactcggtggagattgccaagcgctgc
aacctgacgctgactttggggaaaaattacctgcccgattttccgacgcctaatggtgag
agtctggatcaatatctggtggaccagtctaaagcaggcttggagcaccgcctggcctat
ttgtacccggatgaacagctgcgggaagccaaacgagctgaatacgaagcgcgcttgcag
tttgagtgcggcatcatcattcagatggggtttcctggctactttttgatcgtggccgat
tttattaactgggcaaaaaacaacggcgtgccagtcggaccaggccggggctccggtgcg
gggtctttggtcgcttacagtttggggattaccgacctcgacccgctcaaatacaacctg
ctgttcgagcgtttcttaaacccggagcgggtctccatgcccgactttgatattgacttc
tgtcaggaagggcgagatcgcgtcatcgattacgtcaagcacaaatatggcttggcttcg
gtgtctcagatcgccaccttcgggaccatggcggccaaagcggtgatccgcgatgtgggc
cgcgtgctggatttgccgttcaactttgtcgatggcatcgctaagctcattccaatggag
ctgggcatcacgcttgaatccgcactggaaaaagagccgcaactgcaagagcgccgcgaa
aaagaagaagaggtcgcagaattactgtctttggcattgcggctggaaggcctggtccgt
aacatcggtatgcacgccgggggggtgttgattgcgcctggcaagatttcagatttctcg
cccgtctattgccagcccaatggcgacagtctggtcagtcaatatgataaggatgatgtg
gaggcggtcggcctggttaagttcgactttttgggcctgcgcacgctgactatcctcaat
atggcgcttgaaaacgccaatgcgcagcgcgcgcaagaaacgttgccaccactgagtttt
gagacgattccgctcgatgacaagcgtagctaccatctgctgaaaacagccaatacgaca
gcggtgttccagctggaatcgcgcggcatgaaagatatgcttaagcaagccaagccagac
ttgtttgaagacattattgcgctggttgccttgtaccgtcctggcccaatggatctgatt
ccagacttctgccgccgtaaacatggcacgcagcgcgtggaatacccgcacccgtcgacc
gaatctattctcaaggaaacctacggtattgccgtgtatcaggaacaggtgatgcagatc
gcccaggtggtcgccgggtatagtctcggtggtgcagacttgctgcgccgcgccatgggt
aagaaaaaaccggaagagatggttaaacagcgcgaaatctttaatgaaggtgcgctcaaa
aatggcctgactttgcagcagtccaacgatttgtttgacttgctggaaaagttcgcgggt
tacggctttaacaagtcgcatgcggcagcgtatgccttggtggcttatcataccgcttac
ctcaaagcgcattacccggcggcttttctggcggcgaccatgtctgccgatatgaacaac
accgataacgtgcatacgttttttgatgactgcggcgccaatcatatcgaagtattgccg
ccagacatcaatgccagtgtctatcatttcaagccgctcaatgcgcagcaggtgctttac
ggcctgggcgccatcaaaggcaccggcctggcggcgattgagttgattatggcgtcccgt
cagtctcaaggccctttcaaagacttattcgatttttgtcagcgcctggatttgcgcaag
gtcaaccgtcgggtgattgaatccctgatccgcgccggcgcttttgacaagctggaacct
aaccgggctgcgttgctggcgggcctggatagggcgatcagtgtcgcagagcagggcgcg
gcacacgccgggcaagattgcctgtttggcggggtgatcgaaacgcagcatgctttaccg
gatattgccgcctggagccctgagcaggccttgcaagaagaaaaaacggcgctgggtttt
tacttgagtggccacccttatttaagctacaaagcgcagcttggcccctttattaaaggc
aatctgggtgaactggcgccacaagagcagccgaaactgctggccggggtggtcatgggc
gtacgtgtccgcatgacgcagcgcggaaaaatggcgattgtgacgctggatgatgccgtc
ggacgcgtggatgtggtcgtcggtagcgaactgttgaatcagcacgcacagtggatcaag
gaagaccagctgctggtggtagaagggcgaatcagtaatgatgagttctccggtggcatc
cgcgtcagcgcccgtaaactctatgatctggccgccgtgcgtaaccgttttgcgcaaatg
ctgaccttgagctgcaatggcacttcggatgtgcagcgtctcatgacagtattgacgcct
tatcgctacgccggtgaggaacagaagcgttgtccgatcaaagtcgactaccataaccag
tctgctcaggtgagtttgatgctaggggatgactggcaagtcgtgctgcatgacgacctg
ctacacaatttacagggctggttgtctaaagaaaacgtcaaaatcctttataatgcctga
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