Methylophilus sp. DW102: MTDW_21860
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Entry
MTDW_21860 CDS
T10702
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
medz Methylophilus sp. DW102
Pathway
medz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
medz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MTDW_21860 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
medz03019
]
MTDW_21860 (groL)
03110 Chaperones and folding catalysts [BR:
medz03110
]
MTDW_21860 (groL)
03029 Mitochondrial biogenesis [BR:
medz03029
]
MTDW_21860 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
medz04147
]
MTDW_21860 (groL)
Enzymes [BR:
medz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
MTDW_21860 (groL)
Messenger RNA biogenesis [BR:
medz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
MTDW_21860 (groL)
Chaperones and folding catalysts [BR:
medz03110
]
Heat shock proteins
HSP60 / Chaperonin
MTDW_21860 (groL)
Mitochondrial biogenesis [BR:
medz03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
MTDW_21860 (groL)
Exosome [BR:
medz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MTDW_21860 (groL)
Exosomal proteins of other body fluids (saliva and urine)
MTDW_21860 (groL)
Exosomal proteins of breast cancer cells
MTDW_21860 (groL)
Exosomal proteins of colorectal cancer cells
MTDW_21860 (groL)
Exosomal proteins of bladder cancer cells
MTDW_21860 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
SAM_GIDA_C
Motif
Other DBs
NCBI-ProteinID:
BEV08886
LinkDB
All DBs
Position
2378422..2380062
Genome browser
AA seq
546 aa
AA seq
DB search
MAAKDVRFGDDVRQKMVNGVNVLANAVRVTLGPKGRNVVLERSFGAPTITKDGVSVAKEI
ELKDKFENMGAQMVKEVASKTNDIAGDGTTTATVLAQAIIREGMKSVAAGMNPMDLKRGI
DKAVEAAVADLKAQSKPCTTSKEIAQVGAISANSDASVGQIIADAMDKVGKEGVITVEDG
SGLSNELDVVEGMQFDRGYLSPYFINNPERQIALLDNPFVLLHDKKISNIRDLLPTLEQV
AKAGRPLLIIAEDVDGEALATLVVNNIRGILKTTAVKAPGFGDRRKAMLEDIAILTGGTV
ISEEVGLKLEAVQLHDLGQAKRIEVGKENTIIIDGAGNEEAIKARITQIKTQIEEASSDY
DREKLQERVAKLAGGVAVIKVGATTEIEMKEKKARVEDALHATRAAVEEGIVAGGGVALI
RAREAIAKVKGDNLDQEAGIKIVLRAVEEPLRQITQNAGVEPSVVVNNVAAGKGNYGYNA
ANETYGDMVEMGVLDPTKVTRSALQHAASVAGLMLTTDCMVAELPKEDAPAMGGDMGGMG
GMGGMM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagacgtaagatttggtgatgacgttcgccaaaaaatggtaaatggcgtt
aacgtattggctaacgctgttcgtgtaactttgggccctaaaggccgtaacgtggtattg
gagcgttcttttggcgcgccaaccatcactaaagatggtgtgtctgtggctaaagaaatc
gaactgaaagacaagttcgaaaacatgggcgcacagatggtgaaagaggttgcttctaaa
accaatgatatcgctggtgacggtacaacgactgcgactgtgttggcacaagccattatc
cgcgaaggcatgaaatctgtcgctgccggcatgaacccaatggacctgaagcgcggtatc
gacaaagcagttgaagctgctgtagctgacctgaaagcacaatccaaaccctgtactacc
agcaaagaaatcgcccaagttggcgcgatctctgctaactctgacgcctctgttggccag
atcattgcggatgcaatggacaaagtgggtaaagagggcgtgatcactgttgaagacggt
tcaggcctgagcaacgagctggatgtggttgaaggtatgcagtttgaccgtggttacctg
tctccatacttcatcaacaacccagagcgccaaatcgcgttgctggacaacccattcgtg
ttgttgcacgacaaaaaaatctccaacatccgtgacttgctgccaaccttggagcaagta
gcgaaagctggccgtccattgctgatcatcgctgaagatgtcgatggcgaagcgctggca
accctggtagtgaacaacatccgcggcatcttgaaaacgactgcagttaaagccccaggc
tttggtgaccgtcgtaaagccatgttggaagacatcgcgattctgactggcggtactgtg
atctctgaagaagtgggcctgaaactggaagccgtacaactgcacgatctgggtcaagcc
aaacgcatcgaagtgggcaaagaaaacaccatcatcattgacggtgctggcaacgaagaa
gcgatcaaggcacgtatcactcaaatcaaaacacaaatcgaagaagcttctagcgactac
gaccgtgaaaaactgcaagagcgcgtggccaaactggctggcggtgttgccgtgatcaag
gttggcgcgacgactgaaatcgaaatgaaagagaaaaaagcccgcgtggaagatgcattg
cacgcgacacgtgctgcggttgaagaaggtattgtggctggcggtggcgtggcattgatt
cgtgcccgcgaagcgattgccaaagtgaaaggtgacaacctggatcaagaagccggtatc
aagatcgttctgcgtgcggttgaagaaccactgcgtcagatcactcaaaacgctggcgtt
gaaccatcagtcgtggtgaacaacgtggctgccggtaaaggcaactacggttacaacgca
gccaacgaaacctatggcgacatggttgagatgggcgtactggatccaactaaagtgacc
cgctccgccttgcaacacgcggcttctgtggctggcctgatgctgaccactgactgcatg
gtggctgaactgcctaaagaagatgcaccagcaatgggtggtgatatgggcggtatgggt
ggcatgggcggtatgatgtaa
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