KEGG   Methylophilus sp. DW102: MTDW_23330
Entry
MTDW_23330        CDS       T10702                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
medz  Methylophilus sp. DW102
Pathway
medz03030  DNA replication
medz03410  Base excision repair
medz03420  Nucleotide excision repair
medz03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:medz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MTDW_23330 (polA)
   03410 Base excision repair
    MTDW_23330 (polA)
   03420 Nucleotide excision repair
    MTDW_23330 (polA)
   03440 Homologous recombination
    MTDW_23330 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:medz03032]
    MTDW_23330 (polA)
   03400 DNA repair and recombination proteins [BR:medz03400]
    MTDW_23330 (polA)
Enzymes [BR:medz01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     MTDW_23330 (polA)
DNA replication proteins [BR:medz03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     MTDW_23330 (polA)
DNA repair and recombination proteins [BR:medz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     MTDW_23330 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     MTDW_23330 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 Obc1_cap HHH_5
Other DBs
NCBI-ProteinID: BEV09033
LinkDB
Position
2533280..2536045
AA seq 921 aa
MKTLLLVDGSSYLYRAFHAMPDLRNSANEPVGAIQGVLNMLRRLHKDYPSDYSACVFDAK
GKTFRDDLYPEYKANRASMPDDLRVQIEPLYETIRAMGWPLIIEEGVEADDVIGALAKQA
EKEGIRTIISTGDKDITQLVNENITVVNTMRDAFRKTDDVLDIAGVENKFGIPPSKIIDY
LTLVGDSVDNVPGVEKVGPKTAVKWLTEYGSLDNIIANADNIKGVVGENLRKALPWLPTA
RELITIRCDIGIREHFDELIPKAPDKPALLALFDHFEFRSLKRDLDKLPDGATAPLIENS
VLPTVEELSGQAGGDYSPDTRRLYQTILSDSELEPWLTKLEQAALLCFDTETTSLDPMQA
KIVGVSFSVTPGEAAYIPLTHDYFDAPPQLALTATLAKLKPILENPDIKKVGQNLKYDMH
VLANHGITLQGIAHDTLLQSYVFESHKGHGMDELSERHLGIAPISYESVAGKGAKQVSFS
QVTVEVAAEYAAEDADITLQLHQALYPQVTVSDKLRFIYEQVEMPSMQVLQRMERNGVLI
DSHMLNRQSNEIGLRLMEIEKQAYELAGQPFNLGSPKQLQEILFGKLGIKPLKKTPSGAP
STDEDVLQELALDYPLPKVILEHRSLAKLKSTYTDKLPKMINAQTGRVHTNYNQAVAITG
RLASSDPNLQNIPVRTAEGRRIREAFIAPPGSQIISADYSQIELRIMAHLSQDAGMLTAF
ANNEDIHRATAAEIFGVDKAAVDNEQRRYAKVINFGLIYGMSAFGLAQNLNIERGAAANY
IERYFARYPGVKAYMENTRALAKQQGYVETYFGRRLWVPEINSANVQRRNGAERAAINAP
MQGTAADLIKLAMIAVDQWLTEQKLQTKLIMQVHDELVLEVPEHELALVKQTLPVLMQEV
ATLSVPLLAEVGVGNNWESAH
NT seq 2766 nt   +upstreamnt  +downstreamnt
atgaaaaccctgctgctggtcgatggctccagttatttataccgcgcgtttcacgccatg
ccggatttacgcaactcggccaacgaaccggtcggggcgattcaaggcgtgctgaatatg
ttacggcgcctgcacaaggactatccttctgactatagcgcctgtgtgtttgacgccaag
ggcaaaaccttccgcgacgatctctatcccgaatacaaggccaaccgcgccagcatgccg
gacgatttgcgcgtgcagattgaaccgctatacgaaaccatccgcgcgatgggctggccg
ctgattattgaagaaggcgttgaagccgacgatgtgattggcgcactggccaagcaggcc
gaaaaagaaggtatccgcaccattatctcgactggcgataaagacatcacgcaactggta
aatgaaaatattaccgtggtcaacaccatgcgtgatgccttccgtaaaaccgatgatgta
ttggatattgccggcgtagaaaataaatttggcatcccgcccagcaaaattatcgactac
ctgacattggtcggtgacagtgtagacaatgtgcctggggtcgaaaaagtcggcccaaaa
acggcggtcaaatggctgacagaatatggctctctcgacaatatcattgccaatgccgac
aacatcaaaggcgtggtcggcgagaacttgcgcaaagccctaccctggttacccacggca
cgcgaattgatcaccatccgctgtgatatcggtatccgtgagcattttgatgaactgatc
cccaaagccccggacaagcctgcactactcgcgctgtttgaccattttgagttcagaagc
ttgaagcgtgacttagacaaattgccagacggtgccacagcaccattgattgaaaattca
gtcctaccgaccgtcgaggagcttagcgggcaagccggtggcgattactcgccggatacg
cgacggctttaccagaccattttatcggacagtgaactggaaccgtggctcaccaaactg
gaacaagccgccctgctttgctttgacactgagacgacctcactggaccccatgcaagcc
aaaattgtcggcgtctcgttcagcgtcacgccgggggaagcggcttacatcccgctcacc
catgattactttgatgcgcctccacaactggctttgacggcgaccctggccaaactcaaa
cccatccttgaaaacccggacattaaaaaagtcggccagaaccttaaatacgatatgcat
gtgctggccaatcatggcatcacgctgcaaggcattgcgcacgacaccctgttgcaatcg
tatgtgtttgagagccacaaagggcatggcatggatgagctcagcgagcgccatctgggc
attgcccccatcagctacgaaagcgtggcgggcaaaggcgcaaaacaagtgtcgttcagc
caggtcaccgtcgaggtggctgccgaatatgccgcggaagacgccgacatcacgctgcaa
ctgcatcaggccctgtacccgcaagtgacagtctcggacaaactgcgctttatttatgag
caggtggaaatgcccagcatgcaagtgttgcaacgcatggagcgcaacggcgtgttgatc
gacagccacatgctcaaccgccagagcaatgaaattggcctgcgtttgatggagattgaa
aaacaggcgtatgagctggccggacaaccgtttaacctgggttcgcccaagcagttgcaa
gaaatcctgtttggcaaactgggcatcaaacccttgaaaaaaacgccttctggcgccccc
agtaccgacgaagatgtattgcaggaactggcgctggattacccgttgcccaaggtaatc
ttggagcaccgcagcttggccaagctgaaatccacctacaccgacaagttgccgaaaatg
atcaacgcgcaaaccgggcgcgtgcataccaactacaaccaggcggtggcgattaccggg
cgattggccagctctgaccccaacctgcaaaatattccggtgcgcaccgccgaaggccga
cgcatccgcgaagcttttatcgccccgcccggtagccagatcatctcggcggactattcg
cagattgagctgcgcatcatggcgcatctctcacaagatgccgggatgctgacggccttt
gccaataacgaagacatccatcgcgccacggccgcagaaatttttggcgtggacaaagcc
gccgtagacaacgagcagcgacgctacgccaaagtgattaactttggcctcatctacggc
atgagtgcgtttggcctggcgcaaaacctcaatatcgagcgcggcgcggcggccaattac
attgaacgctattttgcgcgttaccccggtgtcaaagcctatatggaaaacacgcgcgca
ctggccaagcagcaaggctatgtcgaaacctacttcggcagacgcttatgggtgcctgaa
atcaacagcgctaacgtacaaagaagaaacggcgccgaacgcgccgccattaatgccccc
atgcaaggcacggcggccgacctgatcaaactggcgatgatcgccgtcgaccaatggctg
accgagcaaaaactgcagaccaaactcatcatgcaggtgcacgatgaactggtgctggaa
gtgcctgaacatgaactggcattagtcaaacagaccttgcccgtgctcatgcaagaagtg
gcaaccttatcagtgccgttactagccgaggtcggcgtaggcaacaattgggagagcgcc
cactag

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