Methylophilus sp. DW102: MTDW_24580
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Entry
MTDW_24580 CDS
T10702
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
medz Methylophilus sp. DW102
Pathway
medz00300
Lysine biosynthesis
medz00470
D-Amino acid metabolism
medz01100
Metabolic pathways
medz01110
Biosynthesis of secondary metabolites
medz01120
Microbial metabolism in diverse environments
medz01230
Biosynthesis of amino acids
Module
medz_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
medz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
MTDW_24580 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
MTDW_24580 (dapF)
Enzymes [BR:
medz01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
MTDW_24580 (dapF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Pro_racemase
DUF5543
Motif
Other DBs
NCBI-ProteinID:
BEV09158
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Position
2650826..2651656
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AA seq
276 aa
AA seq
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MKLRFTKMQGAGNDFVVIDATRAPVNLSHAQIQHIANRYFGVGCDQLLMVESTTTPDVDF
RYRIFNADGGEVEQCGNGARCFVRFVVDKGLTDKHEIKVETASGVISLKLQEDGQVTVDM
GAPRFTPAQIPFEAEQQATTYELPLASETITVSAVSMGNPHAVMLVDNVHTAEVASLGPQ
IESHPQFPQRVNAGFMQVLNEHEINLRVYERGSGETLACGTGACAAAVSGIQLGTLQSPI
KVHTRGGILTIQWAGGESPVLMTGPAEIVFDGEIEI
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaagattcaccaaaatgcagggcgccggcaatgattttgtcgtcattgatgcg
acacgagcacccgtcaacctctcccatgcccaaatccagcacatcgccaaccgctatttt
ggcgtgggttgcgaccagttattgatggtcgagtcgacgaccacgcctgacgtggacttt
cgttaccgcatttttaatgcagatggtggcgaagttgagcaatgcggcaatggggccagg
tgttttgtgcgatttgtcgtggataaagggctcacagacaaacacgaaatcaaggtcgaa
accgccagtggcgtgatttcgctcaaattacaagaagacggacaagtcaccgtggatatg
ggcgcgcctcgttttacacccgcgcagatcccttttgaggctgagcaacaagcaaccact
tatgaattgccattggcgagcgaaaccatcacagtcagcgcagtatccatgggcaacccg
catgcagtcatgctggtagacaatgtgcatacggctgaagtcgccagccttggtccgcaa
atagaatcgcatcctcaatttccgcaacgcgtgaatgctggttttatgcaggtcctgaac
gagcatgagatcaatttgcgtgtctatgaacgcggcagtggtgaaacgctggcttgcggc
actggcgcctgcgcggcagccgtcagtggcatccaactgggtacactacaaagcccgatc
aaagtccatacccgtggcggcatcctcactatccaatgggcaggcggagagtcgcccgtc
ttgatgaccgggccggcagagattgtatttgacggcgaaattgaaatttaa
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