KEGG   Methylophilus sp. DW102: MTDW_24580
Entry
MTDW_24580        CDS       T10702                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
medz  Methylophilus sp. DW102
Pathway
medz00300  Lysine biosynthesis
medz00470  D-Amino acid metabolism
medz01100  Metabolic pathways
medz01110  Biosynthesis of secondary metabolites
medz01120  Microbial metabolism in diverse environments
medz01230  Biosynthesis of amino acids
Module
medz_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:medz00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    MTDW_24580 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    MTDW_24580 (dapF)
Enzymes [BR:medz01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     MTDW_24580 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF Pro_racemase DUF5543
Other DBs
NCBI-ProteinID: BEV09158
LinkDB
Position
2650826..2651656
AA seq 276 aa
MKLRFTKMQGAGNDFVVIDATRAPVNLSHAQIQHIANRYFGVGCDQLLMVESTTTPDVDF
RYRIFNADGGEVEQCGNGARCFVRFVVDKGLTDKHEIKVETASGVISLKLQEDGQVTVDM
GAPRFTPAQIPFEAEQQATTYELPLASETITVSAVSMGNPHAVMLVDNVHTAEVASLGPQ
IESHPQFPQRVNAGFMQVLNEHEINLRVYERGSGETLACGTGACAAAVSGIQLGTLQSPI
KVHTRGGILTIQWAGGESPVLMTGPAEIVFDGEIEI
NT seq 831 nt   +upstreamnt  +downstreamnt
atgaaattaagattcaccaaaatgcagggcgccggcaatgattttgtcgtcattgatgcg
acacgagcacccgtcaacctctcccatgcccaaatccagcacatcgccaaccgctatttt
ggcgtgggttgcgaccagttattgatggtcgagtcgacgaccacgcctgacgtggacttt
cgttaccgcatttttaatgcagatggtggcgaagttgagcaatgcggcaatggggccagg
tgttttgtgcgatttgtcgtggataaagggctcacagacaaacacgaaatcaaggtcgaa
accgccagtggcgtgatttcgctcaaattacaagaagacggacaagtcaccgtggatatg
ggcgcgcctcgttttacacccgcgcagatcccttttgaggctgagcaacaagcaaccact
tatgaattgccattggcgagcgaaaccatcacagtcagcgcagtatccatgggcaacccg
catgcagtcatgctggtagacaatgtgcatacggctgaagtcgccagccttggtccgcaa
atagaatcgcatcctcaatttccgcaacgcgtgaatgctggttttatgcaggtcctgaac
gagcatgagatcaatttgcgtgtctatgaacgcggcagtggtgaaacgctggcttgcggc
actggcgcctgcgcggcagccgtcagtggcatccaactgggtacactacaaagcccgatc
aaagtccatacccgtggcggcatcctcactatccaatgggcaggcggagagtcgcccgtc
ttgatgaccgggccggcagagattgtatttgacggcgaaattgaaatttaa

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