Methylobacterium currus: DA075_11105
Help
Entry
DA075_11105 CDS
T05184
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
mee
Methylobacterium currus
Pathway
mee03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mee00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DA075_11105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mee03019
]
DA075_11105
03009 Ribosome biogenesis [BR:
mee03009
]
DA075_11105
Enzymes [BR:
mee01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
DA075_11105
Messenger RNA biogenesis [BR:
mee03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DA075_11105
Ribosome biogenesis [BR:
mee03009
]
Prokaryotic type
rRNA processing factors
DA075_11105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Zn_ribbon_19
Anti-TRAP
CDC45
Motif
Other DBs
NCBI-ProteinID:
AWB21397
UniProt:
A0A2R4WIQ4
LinkDB
All DBs
Position
1:2326427..2329741
Genome browser
AA seq
1104 aa
AA seq
DB search
MANKMLIDASHPEETRVVTVKGSKVEEFDFESASRRQLRGNIYLAKVTRVEPSLQAAFVE
YGGNRHGFLAFSEIHPDYYQIPIADRMALLEEEARAEREHEERPERQERSERPERSDQPR
RRRRRGRRAEASSRPADAVVSVPAGETQETGAQASQAQETRQETATEATGWQDTHPQAML
EQETFAQEAPRPEGVEHPAQETAPAGEAQPVEAQGSVEAQVGVQAGDAVAQDGQAQESPS
QEAPAADALAAEHHSAETPAAEVAPVQGEAGAETPAAIAAAVSAEPAHVEAAADEASPEA
RTAGPASEATAPVEAEAALPQPVAASQPVDAAEDEDEDDEDETVAEADGESDDSDEDDDE
DEDGDDDGDDEDDDEDHEEPVVEQVGGRGDALAEIPERPRTPRRHYKIQEVIKRRQVILV
QVVKEERGTKGAALTTYLSLAGRYSVLMPNTGRGGGISRKITSAADRKRLKEIATDLEVP
EGMGVILRTAGASRTKPEIKRDFEYLMRLWESVRELTLSSAAPALVYEEGSLIKRAIRDL
YNKDIDEVLVAGEDAYREAKDFMRMLMPTQSKVVKPYRDPTPIFARFGVEQQLDAMFSNH
VSLRSGGYLVINPTEALVSIDVNSGRATREHDIEDTAYKTNLEAAEEVARQLRLRDLAGL
IVIDFIDMEEKRNNRAVEKKLNECLKNDRARIQVGRISPFGLLEMSRQRIRTGVLESSSV
PCPHCGGSGFVRATASVALLILRAIEEALIKSNSHNLVLRTRTEVALYILNQKRAHLHEL
EARFGVAIIIAADERLAATSAFHLERGDLAQRVEPRPVTSIRAEAVLPPPLEEDDEDEDI
VEDAEAEIEGEADAEAEGETDEETAEGAPGEDEGGGKRRRRRRRRRGRGERGGADEAEGH
EAEGHAAEGHAAEGHLADEAAGEAVQASGERGPEAVSIPITEDGVAPERESREEALSRRR
RRGRRGGRGRDRFEETVGTIGDEVVVGAEPGETGGSLVQDALAEEIVALDEIAGPAPEAV
GSPVAAPPLPAPDRPAVEREALTVKAIEAPAPVGDAEPAAEAVAPAPAPEPEPEPVAVVL
TPPDPDRPKRAGWWSRTKAAIGGE
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaagatgctcatcgatgcctcccacccggaagagacccgggtggtgacggtc
aagggttcgaaggtcgaggaattcgacttcgaatccgctagccgccgccagctgcggggc
aacatctatctcgccaaggtcacgcgggtcgaaccgtcgctgcaggccgccttcgtcgag
tacgggggcaaccgccacggcttcctcgccttcagcgagatccaccccgactactaccag
atcccgatcgccgaccggatggcgctcctcgaggaggaggcgcgggccgagcgcgagcac
gaggagcgccccgagcgccaggagcgcagcgagcgtccggagcgcagcgaccagccccgc
cgccggcgccgccgcggccgccgggccgaggcctcgtcgcgcccggccgatgcggtggtg
agcgtccccgccggggagacgcaggagaccggcgcgcaggcctcccaggcacaggagacc
cgccaggagaccgccaccgaggcgaccggctggcaggacacgcacccccaggcgatgctc
gagcaggagacgttcgcgcaggaggccccgcggccggagggcgtagagcatccggcgcag
gagacggccccggccggcgaagcgcagccggtcgaggcgcagggttccgtcgaggctcag
gtcggggtccaggccggcgacgccgtcgcgcaggacggccaggctcaagagagcccgtcc
caggaagcgcctgccgcggacgcgctcgccgccgagcaccattcggccgagacacccgcc
gccgaggtggccccggtgcagggtgaggccggcgccgagaccccggcggcaatcgccgcc
gccgtgtcggcggagcctgcccatgtcgaggcggcggccgacgaagcgtcgcccgaggcc
cggaccgccggcccggcatccgaggcgaccgcgcccgtcgaggccgaggccgccttgccc
cagcccgtcgccgcctcgcagccggtcgatgccgccgaggacgaggacgaggacgacgag
gacgagaccgtcgccgaggcggacggggagtccgacgactcggacgaggacgacgacgag
gacgaagacggggacgacgacggggacgacgaggacgacgacgaggatcacgaggagccg
gtcgtcgagcaggtcggcggccgcggcgacgcgctggccgagatccccgagcggccccgc
accccgcgccggcactacaagatccaggaggtgatcaagcgccggcaggtcatcctggtc
caggtcgtcaaggaggagcgcggcaccaagggcgcggcgctcaccacctacctgtcgctc
gccggccgctactcggtcctgatgcccaataccggccggggcggcggcatctcgcgcaag
atcaccagcgcggccgaccgcaagcgcctgaaggagatcgccaccgacctcgaggtgccc
gaggggatgggcgtcatcctgcgcacggcgggcgcctcgcgcaccaagccggagatcaag
cgcgacttcgagtacctgatgcggctgtgggagagcgtgcgcgagctcaccctgtcctcc
gccgcgccggccctggtctacgaggagggctcgctgatcaagcgcgccatccgcgacctc
tacaacaaggacatcgacgaggttctggtcgcgggcgaggacgcctaccgcgaggccaag
gacttcatgcggatgctgatgccgacgcagtcgaaggtggtgaagccctaccgcgacccg
acgccgatcttcgcccgcttcggggtcgagcagcagctcgacgcgatgttctccaaccac
gtctccctgcgctcgggcggctacctcgtcatcaacccgaccgaggccctggtctcgatc
gacgtgaactcggggcgggccacccgcgagcacgacatcgaggacaccgcgtacaagacg
aacctggaggccgccgaggaggtggcgcgccagctgcgcctgcgcgacctcgccgggctc
atcgtcatcgacttcatcgacatggaggagaagcggaacaaccgcgccgtcgagaagaag
ctgaacgagtgcctgaagaacgaccgcgcccgcatccaggtcggccggatctcgcccttc
ggcctgctcgagatgtcgcgccagcgcatccgcaccggcgtgctcgagtcgtcctcggtg
ccctgcccgcattgcggcggctcgggcttcgtgcgggcgaccgcctcggtggccctgctg
atcctgcgggcgatcgaggaagcgctgatcaagtcgaacagccacaacctggtgctgcgc
acccggaccgaggtggcgctctacatcctcaaccagaagcgcgcgcacctgcacgagctc
gaggcccggttcggcgtcgcgatcatcatcgcggccgacgagcggctggccgcgacctcg
gccttccacctcgagcgcggcgacctcgcccagcgggtcgagccgcgccccgtcaccagc
atccgggccgaggcggtgctgccgccgccgctggaggaggatgacgaggacgaggacatc
gtcgaggacgccgaggccgagatcgagggcgaggccgacgcggaggccgagggcgagacc
gacgaggagaccgccgagggtgcgcccggcgaggacgagggcgggggcaagcgccgccgt
cgccgccgccgccggcggggccggggcgagcgtggcggcgccgacgaggccgagggccac
gaggcagagggacacgcggccgagggacacgcggccgagggacacctggcggacgaggcg
gccggcgaggcggtccaggcctcgggcgagcgcggtcccgaggcggtgtcgatcccgatc
accgaggacggcgtggcgcccgagcgcgagagccgcgaggaggccctgagccggcgccgc
cggcgcggacgccgcggcggccgcgggcgcgaccgcttcgaggagacggttggcacgatc
ggcgacgaggtcgtggtcggggccgagccgggcgagaccggcggcagcctggtgcaggat
gccctcgccgaggagatcgtcgccctcgacgagatcgccgggccggcaccggaggcggtc
ggcagtccggtcgcggcgccgcccctcccggcccccgatcgtcccgccgtggagcgcgag
gccctgaccgtcaaggcgatcgaggccccggcgcccgtcggcgacgccgagcccgccgcc
gaggcggtggcccctgcccccgctccggagcccgagccggagccggtggcggtcgtgctg
accccgcccgatccggaccgtccgaagcgggccggctggtggtcccgcaccaaggcggcg
atcggcggcgagtga
DBGET
integrated database retrieval system
