Methylobacterium currus: DA075_13895
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Entry
DA075_13895 CDS
T05184
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mee
Methylobacterium currus
Pathway
mee03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mee00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DA075_13895 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mee03021
]
DA075_13895 (rpoC)
03400 DNA repair and recombination proteins [BR:
mee03400
]
DA075_13895 (rpoC)
Enzymes [BR:
mee01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DA075_13895 (rpoC)
Transcription machinery [BR:
mee03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DA075_13895 (rpoC)
DNA repair and recombination proteins [BR:
mee03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DA075_13895 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
ApbA_C
DUF6241
Motif
Other DBs
NCBI-ProteinID:
AWB21880
UniProt:
A0A2R4WK03
LinkDB
All DBs
Position
1:2978190..2982395
Genome browser
AA seq
1401 aa
AA seq
DB search
MNQEVMNLFNQQAQPQSFDQIKISISSPEKILSWSYGEIKKPETINYRTFKPERDGLFCA
RIFGPIKDYECLCGKYKRMKYKGVICEKCGVEVTLARVRRDRMGHIELAAPVAHIWFLKS
LPSRIGLLLDMALKDLERILYFESYVVIEPGLTPLKERQLLSEEEYLRAQEEYGEDSFTA
MIGAEAIRRILQELDLDKIAADLREEIATTTSELKPKKLLKRLKIIEAFQMSGNRPEWMI
LTVVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPDIIIRNEKRM
LQEAVDALFDNGRRGRVITGANKRPLKSLADMLKGKQGRFRQNLLGKRVDYSGRSVIVVG
PELKLHQCGLPKKMALELFKPFIYARLDAKGFSATVKQAKKLVEKEKPEVWDILDEVIRE
HPVMLNRAPTLHRLGIQAFEPKLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQL
EARVLMMSTNNILHPANGAPIIVPSQDIVLGLYYLSIVADGSPGEHKPNDPKNPMKGVFG
DFGELEHALAARTVTLHTKIKWRWKGLDSEGNEVTRIYDTTPGRVILSSVLPRHKRVPFD
VVNKLMTKKEISAMIDTVYRHCGQKESVIFCDRIMGLGFIHAFRAGISFGKDDMVVPDNK
WSIVEETRSLVKDYEQQYQDGLITQGEKYNKVVDAWAKCSDRLAGEMMNRISSVQKDEHG
ADKQVNSIYMMSHSGARGSPAQMKQLAAMRGLMAKPSGEIIETPIISNFKEGLDVLEYFN
STHGARKGLADTALKTANSGYLTRRLVDVAQDAVIREVDCGTESGIRMRAIIDAGQVVAS
LATRILGRATAEDLVANDGSIIVAKGETIEEKHLDAITKAGIQEVKIRSVLVCATRNGVC
ATCYGRDLARGTPVNMGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQIADSSFIESSFEG
TVKIRNRGLARNSDGDLIATGRNVAVVIVGPDGTERAVHRLQYGARVRVDEGDAIKRGQR
IAEWDPYTRPILTEIDGIVAYEDLIDGQSITETTDESTGIAKRVVIDWRGSARTADLRPA
IAVHDQNGRVQKLPRGSDARSLLPVEAIIGVDPGTRVKAGDILARVSTESAKTRDITGGL
PRVAELFEARRPKDAAIIAEKSGTISFGRDYKNKRRLSLTPHDGSEPVEYLIPKGKHIHL
QDGDVVELGDFIVDGNPAPHDILAIKGVEELAAYLVNEIQEVYRLQGVSINDKHIEVIVR
QMLQKVEITDGGDSEILTGDQIDRMELAEINEQLLAEGKKPVQGVPVLLGITKASLQTRS
FISAASFQETTRVLTEAAVNGKVDNLEGLKENVIVGSLIPAGTGAMISDIKSIARRRDAL
IMAQKSAESGAAVAERLPAAE
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaagaggtcatgaatcttttcaaccagcaggctcagcctcagagcttcgaccag
atcaagatctcgatctcgtcgcctgagaagatcctgtcctggtcctacggcgagatcaag
aagcccgagaccatcaactatcgcacgttcaagcccgagcgtgacggcttgttctgcgcc
cggatcttcgggccgatcaaggattacgagtgcttgtgcggcaagtacaagcgcatgaag
tacaagggcgtgatctgcgagaagtgcggcgtcgaggtgaccctcgcgcgcgtgcggcgc
gaccgcatgggccatatcgagctggccgcgcccgtcgcccatatctggttcctgaagtcg
ctgccgagccgcatcggcctgctgctcgacatggcgctcaaggatctcgagcgcatcctg
tacttcgagtcctacgtcgtcatcgagccgggcctcacccccctgaaggagcgtcagctc
ctctcggaggaggagtacctgcgcgcgcaggaggagtacggcgaggacagcttcaccgcc
atgatcggcgcggaggcgatccggcgcatcctgcaggagctcgatctcgacaagatcgcg
gccgacctgcgcgaggagatcgccaccaccacctccgagctgaagcccaagaagctcctg
aagcgtctcaagatcatcgaggcgttccagatgtcgggcaaccggcccgagtggatgatc
ctgaccgtcgtgccggtcatcccgccggacctgcgcccgctggtgccgctcgacggcggc
cgcttcgcgacctccgacctcaacgacctctaccgccgcgtcatcaaccgcaacaaccgc
ctgaagcggctgatcgagctgcgcgcgccggacatcatcatccgcaacgagaagcggatg
ctgcaggaggccgtcgacgcgctgttcgacaacggccgccgcggccgcgtcatcacgggc
gccaacaagcgcccgctgaagtcgctcgccgacatgctgaagggcaagcagggccgcttc
cgccagaacctgctcggcaagcgcgtcgactattccggccgctcggtcatcgtggtcggc
ccggagctgaagctgcaccagtgcgggctgccgaagaagatggcgctcgagctgttcaag
ccgttcatctatgcgcgcctcgacgccaagggcttctcggccacggtgaagcaggccaag
aagctcgtcgagaaggagaagccggaggtctgggacatcctggacgaggtgattcgcgag
cacccggtgatgctgaaccgggcgccgacgctgcaccggctgggcatccaggccttcgag
ccgaagctgatcgagggcaaggcgatccagctgcacccgctggtctgcgccgcgttcaac
gccgatttcgacggcgaccagatggccgtgcacgtcccgctgtcgctcgaggcgcagctg
gaagcgcgcgtcctgatgatgtcgacgaacaacatcctgcaccccgcgaacggcgcgccg
atcatcgtgccgtcgcaggacatcgtgctcggcctgtactacctgtcgatcgtcgccgac
ggctcgccgggtgagcacaagccgaacgaccccaagaacccgatgaagggcgtgttcggc
gatttcggcgagctcgagcacgcgctcgcggcccgcaccgtcacgctgcacaccaagatc
aagtggcgctggaagggcctcgattccgagggcaacgaggtcacccggatctacgacacc
acgccgggccgcgtgatcctgtcgagcgtgctgccgcgccacaagcgcgtgcccttcgac
gtcgtcaacaagctgatgacgaagaaggagatctcggcgatgatcgacaccgtctaccgc
cattgcggtcagaaggagtcggtgatcttctgcgaccggatcatgggtctcggcttcatc
cacgccttccgcgccggcatctcgttcggcaaggacgacatggtggtgccggacaacaag
tggtcgatcgtcgaagagacgcgctcgctcgtcaaggactacgagcagcagtaccaggac
ggcctgatcacccagggcgagaagtacaacaaggtcgtggacgcctgggccaagtgctcc
gaccgtctcgccggcgagatgatgaaccgcatctcgtccgtgcagaaggacgagcacggc
gccgacaagcaggtcaactcgatctacatgatgagccactcgggcgcccgtggctcgccg
gcgcagatgaagcagctcgcggcgatgcgcggtctgatggccaagccctcgggcgagatc
atcgagaccccgatcatctcgaacttcaaggaaggcctggacgtgctcgagtacttcaac
tcgacgcacggcgcccgcaagggcctcgccgacaccgcgctcaagaccgcgaactcgggc
tacctgacccgccgccttgtcgacgtggcgcaggacgcggtgatccgcgaggtggattgc
ggcaccgagagcggcatccggatgcgggcgatcatcgatgccggccaggtcgtggcctcg
ctggcgacccgcatcctcggccgtgccacggccgaggacctggtcgccaatgacggctcg
atcatcgtcgccaagggcgagaccatcgaggagaagcacctcgatgcgatcaccaaggcc
ggcatccaggaggtgaagatccgctcggtcctggtctgcgcgacccggaacggcgtctgc
gccacctgctacgggcgcgacctcgcccgcggcacgcccgtcaacatgggcgaggccgtc
ggcgtcatcgcggcgcagtcgatcggcgagccgggcacccagctcacgatgcgcaccttc
cacatcggcggcgcggcccagatcgccgactcgtccttcatcgagtcgagcttcgagggc
acggtgaagatccgcaaccgcggtctcgcccgcaactcggacggtgacctgatcgccacc
ggccgcaacgtggcggtggtgatcgtcgggccggacggtaccgagcgggcggtccaccgc
ctgcaatacggcgcccgcgtccgggtcgacgagggcgacgcgatcaagcgcggccagcgc
atcgccgagtgggatccctatacccggccgatcctgaccgagatcgacggcatcgtcgcc
tacgaggacctgatcgacggccagtcgatcaccgagacgaccgacgagtcgacgggcatc
gccaagcgcgtggtcatcgactggcgcggctcggcgcggacggcggacctgcgtccggcg
atcgcggtccacgaccagaacggacgggtgcagaagctgccgcgcggctcggacgcgcgc
tcgctcctgccggtcgaggccatcatcggcgtcgatccgggcacccgggtcaaggccggc
gacatcctcgcccgcgtctcgaccgagagcgccaagacccgcgacatcaccggcggcctg
ccgcgggtggcggagctgttcgaggcgcgccggccgaaggacgcagcgatcatcgccgag
aagtccggcacgatctcgttcgggcgcgactacaagaacaagcgccgcctgagcctgacc
ccgcatgacggctccgagccggtggagtacctgatcccgaagggcaagcacatccacctg
caggacggcgacgtggtcgagctcggcgacttcatcgtcgacggcaacccggccccgcac
gacatcctggcgatcaagggcgtggaggagctcgccgcctatctcgtcaacgagatccag
gaggtctaccggctgcagggcgtgtcgatcaacgacaagcacatcgaggtcatcgtccgg
cagatgctgcagaaggtggagatcaccgacggcggcgattccgagatcctgacgggcgac
cagatcgaccggatggagctggcggagatcaacgagcagctgctcgccgagggcaagaag
ccggtccagggcgtccccgtcctgctcggcatcaccaaggcttcgctgcagacgcgctcg
ttcatctcggcagcgtcgttccaggagaccacccgcgtcctcaccgaggcggcggtcaac
ggcaaggtcgacaacctcgagggcctgaaggagaacgtgatcgtcggctcgctgatcccg
gcgggcaccggcgcgatgatctccgacatcaagtcgatcgcgcgtcggcgcgacgccctg
atcatggcccagaagtccgccgagagcggcgcggccgtggccgagcggctcccggcggcc
gagtag
DBGET
integrated database retrieval system
