Methylobacterium currus: DA075_25540
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Entry
DA075_25540 CDS
T05184
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mee
Methylobacterium currus
Brite
KEGG Orthology (KO) [BR:
mee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mee03032
]
DA075_25540
03400 DNA repair and recombination proteins [BR:
mee03400
]
DA075_25540
Enzymes [BR:
mee01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
DA075_25540
DNA replication proteins [BR:
mee03032
]
Prokaryotic type
DNA Topoisomerases
DA075_25540
DNA repair and recombination proteins [BR:
mee03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DA075_25540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
FmdA_AmdA
TPR_TTI1_N
Motif
Other DBs
NCBI-ProteinID:
AWB23839
UniProt:
A0A2R4WQN5
LinkDB
All DBs
Position
1:5541864..5543177
Genome browser
AA seq
437 aa
AA seq
DB search
MLSDPEMAEPAAEDRVDTRDAAREAGLRYVSDEEPGYRRKRNGRGFAYVDGTGAKVRDAA
ALARIRSLAIPPAYTDVWICRHANGHIQATGRDARGRKQYRYHPEFRQARESTKFAHMMT
FAEVLPGIRATVEEHMGRRGLPREKVLATVVHLLETTLIRVGNDDYAKQNKSYGLTTLRD
PHVRIEGRELRFRFKGKSNKVWELAVHDRRVAKIVKACQDLPGQELFQYLDEDGEQRDVT
SADVNAYLREITGRDITAKDFRTWSGTVLAAMALREFEAFDSEAKAKRNVRAAIERVAER
LGNTPTICRKCYIHPEILGCYLEGELLLQVKDEVEAALRDDIARLRPEETAVLGLLQGRL
ARAAQEARTKAGTGRNKGSSSKGSSNKGSSSKRSTSKDRMKEAEPGKGTMAKGRSVKGER
ASAGSSRSGKAAARKAA
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcggatcccgagatggcggagcctgccgccgaggatcgcgtcgacacccgcgac
gccgcccgcgaggccggcctgcgctacgtcagcgacgaggagccgggctatcgtcgcaag
cgcaacgggcgcggcttcgcctatgtcgacggcacgggcgcgaaggtgcgcgacgcggcg
gcgctggcgcggatccggtcgctcgcgatcccgcccgcctataccgacgtgtggatctgc
cgccacgccaacggccacatccaggccacggggcgcgatgcccgcggccgcaagcagtac
cgctaccatccggagttccgccaggcccgggagagcaccaagttcgcccacatgatgacc
ttcgcggaggtgctgccgggcatccgcgcgacggtcgaggagcatatgggccggcgcggg
ctgccgcgcgagaaggtgctggcgacggtggtgcacctgctcgagaccaccctgatccgg
gtcggcaacgacgattacgccaagcagaacaagagctacggcctcaccaccctgcgcgac
ccgcatgtcaggatcgagggccgggagctgaggttccgcttcaagggcaagagcaacaag
gtctgggagctcgcggtccacgaccgccgggtggcgaagattgtcaaggcctgccaggac
ctgcccggccaggagctgtttcagtacctcgatgaggacggggagcagcgggacgtgacc
tcggccgacgtgaacgcgtatcttcgcgagatcaccggccgcgacatcaccgccaaggat
tttcggacgtggtccgggacggtgctggccgcgatggccttgcgcgagttcgaggccttc
gacagcgaggccaaggccaagcgcaacgtgcgcgcggcgatcgagcgggtggccgagcgg
ctcggcaacacgccgacgatctgccgcaagtgctacatccacccggagatcctcggctgc
tacctcgagggcgagctgctgctccaggtcaaggacgaggtcgaggcggccctgcgcgac
gacattgcccgcctcaggcccgaggagacggcggtgctcggcctgctccagggccgcctc
gcccgggccgcgcaggaggcgaggacgaaggccgggacggggcgcaacaagggatcctcg
agcaaggggtcctcgaacaagggatcctcgagcaaacggtccacgagcaaggaccgcatg
aaggaggcggagccgggcaagggaaccatggcgaaggggcgctcggtcaagggtgaaaga
gcttcggccggctcgtcacggtccggcaaggcggcggcccgcaaggccgcctga
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integrated database retrieval system
