Methylomonas sp. EFPC3: PL263_00725
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Entry
PL263_00725 CDS
T10335
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K12146
hydrogenase-4 transcriptional activator
Organism
meec Methylomonas sp. EFPC3
Brite
KEGG Orthology (KO) [BR:
meec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
meec03000
]
PL263_00725
Transcription factors [BR:
meec03000
]
Prokaryotic type
Helix-turn-helix
Other families
PL263_00725
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
PAS
PAS_4
PAS_8
AAA_5
PAS_9
HTH_8
AAA
AAA_2
Mg_chelatase
PAS_10
Diguanyl_cycl_sensor
AAA_16
nSTAND3
TIP49
AAA_30
AAA_7
AAA_3
HTH_50
TP_0454_N
Motif
Other DBs
NCBI-ProteinID:
WFP50563
LinkDB
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Position
158780..160570
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AA seq
596 aa
AA seq
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MTNPARSDAKPTILMVDDNPVNLEELAFLLNDAGFDVLRAETGETALELAKSRQPDLVLL
DVLMPGVDGFTTCATLKSHPATREIPVLFMTALADTANKVQGFHVGAVDYITKPFQYEEV
IARVQTHLTLQKLKSELQEKEQRLSRIFENAMDAILALDQDGRITMFNAAAEQMFRCKAG
DNIGRSVDRFLSPELYKTVTNFRAGVPAKQAIWISEGMTARRGDDSEFPIEATISRVEAS
GQQLYILILRDINERKAREQAEAECHTLRGINSYLQEEVLASRDGEELIGNSAGLRQAMA
LVKQVAATDATVLITGETGTGKELIARAIHNLSGRKDKTLVKLNCATIPENLAESELFGH
EKGAFTGAINRKLGRFELANGGTLFLDEIGELPLEMQAKLLRVLQEGEYERVGGTQTLKC
DVRVIAATHRDLAQFSQEGRFRADLYYRMNVFPIHLPPLRERKEDIPHLVRHFINKYAAK
FGKKISAIPDRLMSDMQSYIWPGNIRELQHIIERAVILTNGSQLANVECVHATAPVGATS
SAPIVTLDEAERQHILKALEATSWRIAGNQGAAKILGVPSTTLRSRMERLGISKPA
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaccccgcccggtccgacgccaaacccaccatcttgatggtggacgacaatccg
gtgaatctggaagagctggcgtttttattgaacgatgccggtttcgacgtgctgcgcgcc
gagaccggcgaaaccgcgctggaactggcgaaaagccggcagcctgatctggtgttgctg
gacgtgctgatgccgggtgtagacggtttcaccacttgcgccaccttgaaaagccatccg
gccacgcgcgagattccggtgctgttcatgacggcgctggccgacactgccaacaaggtg
cagggctttcatgtcggcgcggtcgattacatcaccaagccgtttcagtacgaggaagtc
atcgcccgggtacaaacccatctgaccttgcaaaagctcaaatccgagctgcaggaaaag
gagcaacgcctatcgcgcatcttcgaaaacgcgatggatgcgattctggccttggaccag
gacgggcggattaccatgttcaatgccgccgccgagcagatgttccgctgcaaggccggc
gacaacatcggccgttctgtggatcgcttcctgtcgccggagttgtacaagaccgtgacc
aattttcgcgctggcgtgccggccaaacaggcgatctggatatccgagggcatgaccgcc
cgccgcggcgacgatagcgaattcccgatcgaagccacgatatcgcgggtcgaagcctcc
gggcagcagctctacatcctgattctgcgcgacatcaacgaacgcaaggcgcgggagcag
gcggaagcggagtgccataccctgcgcggcatcaactcctacctgcaggaggaagtcctg
gccagccgcgacggcgaggaattgatcggcaactcggccggcctgcgtcaggccatggcc
ctggtcaagcaggtggcggcgaccgacgcgacggttttgatcaccggcgagaccggtacc
ggcaaggagttgattgcccgggcaatccataatctgagtggacgcaaggacaagacgctg
gtcaaattgaactgtgccacgattccggaaaacctggcggaaagcgaattgttcggtcac
gaaaagggcgccttcaccggcgcgatcaaccgcaaactgggccggttcgagctggccaac
ggcggcacgctgtttctcgacgaaatcggcgaactgccgctggaaatgcaggccaaactg
ctgcgggtattgcaggagggcgaatacgaacgggtcggcggcacccaaaccctgaaatgc
gacgtgcgggtcatcgccgcgacccaccgcgatctggcccagttctctcaagagggccgg
ttccgcgccgacctgtattaccggatgaacgtgtttccgattcatttgccgccgctacgc
gaacgcaaggaagacatcccgcatctggtgcggcatttcatcaacaaatacgccgccaaa
ttcggcaagaagatcagcgcgattccggatcggctgatgtcggacatgcaaagctacatc
tggcccggcaatatccgcgaattgcaacacatcatcgaacgcgcggtgatcctgaccaac
ggctcgcaactggccaacgtcgaatgcgtgcacgccaccgcgccggtcggggccacgagc
tcagcgccgatcgtgacgctggacgaagccgaacgtcagcacattctgaaagcgctggaa
gccacctcctggcgcatcgccggcaaccagggcgccgccaaaatcctcggtgtgccgtca
accacgttgcgttcgcggatggagcgtttgggtatcagcaagccggcctga
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