Methylomonas sp. EFPC3: PL263_01295
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Entry
PL263_01295 CDS
T10335
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
meec Methylomonas sp. EFPC3
Pathway
meec03030
DNA replication
meec03430
Mismatch repair
meec03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
meec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PL263_01295 (dnaE)
03430 Mismatch repair
PL263_01295 (dnaE)
03440 Homologous recombination
PL263_01295 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
meec03032
]
PL263_01295 (dnaE)
03400 DNA repair and recombination proteins [BR:
meec03400
]
PL263_01295 (dnaE)
Enzymes [BR:
meec01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PL263_01295 (dnaE)
DNA replication proteins [BR:
meec03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PL263_01295 (dnaE)
DNA repair and recombination proteins [BR:
meec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PL263_01295 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Bac_A_amyl_C
DUF1869
Motif
Other DBs
NCBI-ProteinID:
WFP50674
LinkDB
All DBs
Position
284004..287492
Genome browser
AA seq
1162 aa
AA seq
DB search
MSPSFVHLRIHTEFSLVDGIVRIKPLVKKLSEFQMPAAAITEQSNLFSLVKFYKAAQGAG
IKPIAGADVWIYNPEEPTAPHRLTLLARNQPGYVTLTELVSRGYQEGQHQGIPMLQKDWI
AENHNGLIALSAAMQGDIGAALLAENRAQARACAEFWSGLFPDCFYLELQRVGKSDEERY
IALAVELAAEMDLPVVATNDVRFLNPSDFEAHEVRVCIHQGRVLDDSRRPKDYTNQQYLR
SPEEMAELFADIPEALQNSVEIARRCTVELRLGENFLPDFEVPDGMTLADYFKQASREGL
EERLQQHAPVGNGSFEENRKVYDQRLEIELNVIVQMGFPGYFMIVADFIQWAKNNDIPVG
PGRGSGAGSLVAYALKITDLDPIEFDLLFERFLNPERVSMPDFDIDFCMERRDEVIDYVA
RHYGRDHVSQIITYGSMAAKAVIRDVGRVMGHAYGFVDRLAKLIPFEIGMTLDKALQESQ
ELKDLYEAEEEVKQLVDMARSLEGISRNAGKHAGGVVIAPTKLTDFSPLYCEQGGGNLVT
QFDKDDVEAVGLVKFDFLGLRTLTIIDWALQTINRQRAEKGEPPIDIAQIPRDDLPSYEL
LKNAQTTAVFQLESSGMKALIKKLKPDCFDDIIALVALFRPGPLESGMVDDYINVKHGAK
AEYAHPLLEPILKPTNGVILYQEQVMQIAREMASYTLGGADMLRRAMGKKKPEEMAKERA
KFTEGAIANNIDESIATYIFDLMEKFAGYGFNKSHSAAYALVAYQTAWLKAHYPAAFMAA
VMSSDMDNTDKVVVLIEECREMKLQICPPDINLSDFRFTVNDKGEIVYGIGAIKGVGENA
IDDLLKERNTNGPYSGLYDLCKRVDLRKVNRRVLEALIKAGALDSIDPNRAAHMAELTTA
LRVAEQHGKMALAGQNDLFGLGVEVEASDNEADAYSTMVEPWTEKEKLEAEKQTLGLFLS
GHPIAEYLPELKHITHGTLGSLEVDAGRARGKMEARVAGLIVEMRTRQTKQGKMMGFATL
DDRTGRLEVAAFSGIFDKYRNLLSKDTILIAEGSLAMDDFSNSLRMTAEKLYGMEEAREI
FARSITLEIDIASADLPSDWLARLRDTLLPFRGGQCPLELEYRTASDKAALKLGDEWRVR
PADELLIRLRRLLNEGSVKVRY
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgagtccgagcttcgttcatctgcgtattcataccgagttttcgctggtcgacggcatc
gtccggatcaagccgctggtaaaaaaactcagtgaatttcaaatgccggccgcagctatc
accgaacagagcaatctgttctcgctggtcaaattctacaaggccgcgcaaggcgccggt
atcaaaccgatagccggcgccgatgtctggatttataaccccgaagaaccgacggcgccg
catcgcttgaccttgctggcccgcaaccagccgggttacgtgacgctgaccgagttggtt
tcccgcggttatcaggagggccagcaccagggcattccgatgctgcagaaagattggatt
gccgaaaaccacaacggcttgatcgcgttgtccgcggcgatgcagggcgacatcggtgcc
gcgctgctggcggaaaatcgggctcaggcccgcgcctgcgccgaattttggagcggtttg
ttccccgattgtttttatctggaattgcaacgcgtcggcaagtcggacgaagaacgctac
atcgctctggcggtggagttagccgccgaaatggacctgccggtcgttgccactaacgac
gtgcgctttttaaaccccagcgacttcgaagcccatgaagtgcgggtctgcattcaccag
ggccgggtactggacgatagccggcggccgaaagactataccaatcagcagtatttgcgt
agccccgaggaaatggccgagttgttcgccgatattccggaagctttgcaaaacagcgtc
gaaatcgccaggcgttgcaccgtcgaattgcgcctgggcgaaaactttctgccggatttc
gaagtgccggatggcatgactctggccgattatttcaagcaagcctcgcgcgaaggtctg
gaggagcgcttgcaacagcatgcgcctgttggtaatggcagcttcgaggaaaaccgtaag
gtctacgaccaacggctggaaatcgagctgaacgtgatcgtgcagatgggtttccccggc
tacttcatgatcgttgccgatttcatccaatgggccaagaacaacgacattccggtcggg
ccgggccgggggtccggcgccggctccctggtggcgtatgcgttgaagatcaccgacctc
gatccgatcgaattcgatctactgttcgaacgctttctgaatccggaacgggtatcgatg
cccgactttgacatcgacttctgcatggaacgccgcgacgaggtgatcgattacgtcgcc
cgccattatggtcgcgaccacgtctcgcagatcattacctacggttcgatggcggccaag
gcggtaatccgcgacgtgggtagggtgatggggcatgcctacggtttcgtcgaccggctg
gcgaaactgattccgttcgaaatcggcatgacgctggacaaggccttacaggaaagtcag
gagctgaaagacctgtacgaagccgaagaagaggtcaaacaactggtcgacatggcccgc
tcgctggaaggtatttcccgcaacgccggcaagcatgctgggggcgtagtgatcgcgccg
accaaactcaccgatttttcgccgctgtattgcgagcagggcggcggcaacctggtgaca
cagttcgataaggacgacgtcgaagcggtcgggttggttaaattcgacttcttgggcctg
cgcacgctgaccattatcgattgggcgctacagactattaaccgccagcgcgccgagaaa
ggcgagccgccaatcgacattgcccaaattccgcgcgacgatttgcccagttacgagttg
ctgaaaaacgcccagaccacggcggtgttccaactcgaatcgagcggcatgaaggcgctg
attaaaaaattgaagcccgactgcttcgacgacatcatcgcgctggtggccttgttccgc
cccggtccgctggaatcgggcatggtcgacgactacatcaacgtcaagcacggcgccaag
gccgagtacgcccatccgttgctggaaccgattctgaagcccaccaacggcgttattttg
taccaggagcaggtgatgcaaatcgcccgcgaaatggccagctataccctgggtggcgcc
gacatgctgcggcgggcgatgggtaagaaaaagccggaagaaatggccaaggagcgcgcc
aaatttaccgagggtgcgatcgccaacaacatcgacgagagcatcgcgacctacatcttc
gacttgatggagaagttcgccggctacggtttcaacaagtcgcactcggcggcctacgcg
ctggtggcctatcagaccgcctggctgaaagcgcattacccggccgcgttcatggcggca
gtgatgtcgtctgacatggacaacaccgataaggtggtggtgttgatcgaggaatgtcgg
gagatgaaactacaaatctgcccgcccgatatcaatctgtccgacttccgtttcacggtc
aacgataagggcgagatcgtgtatggcattggcgcgatcaagggcgtcggcgaaaacgcg
atcgacgatttgctaaaagaacgtaacaccaacggcccttattccggcttatacgacctg
tgcaagcgggtcgatctgcgcaaagtcaatcgtcgggtgttggaagctttgatcaaggcc
ggcgcgctggattcgatcgacccgaaccgcgccgcgcacatggccgagttgaccaccgcg
ctgcgggtcgccgagcaacacggcaaaatggcgttggccggccagaacgacttgtttggc
ttgggcgtcgaagtcgaggcaagcgacaacgaggctgacgcctattcgactatggtcgag
ccctggaccgaaaaagaaaagctggaagccgagaagcagaccctgggtttgttcctgtcc
ggtcatcccatagccgagtacctgccagagttgaagcacatcactcacggtacgctgggt
agcctggaagtcgatgccggccgggcccgcggcaagatggaagcccgcgtcgccggcctg
atcgtggaaatgcgcacccgccagaccaagcagggcaagatgatgggttttgccacattg
gacgaccgtaccggtcgtctggaagtcgccgcgtttagcggtattttcgataaatatcgg
aatctgttgagcaaagatacgattttgattgccgaaggctcgctggccatggacgatttc
agtaatagcctgcgtatgaccgccgaaaaactgtacggcatggaagaggcgcgcgagatc
tttgcgcgcagcataacgctggaaatcgatatcgcgagcgccgatctgccaagcgactgg
ctggcgcggttgcgggatacgctgttaccgttccgcggcgggcaatgtccgctggaactg
gaatatcgcacggccagcgataaggcggcgctgaaattaggcgacgaatggcgggtgcga
ccggcggacgaattgttgatccgtttgcgcaggctgttaaacgaaggcagcgttaaagtc
agatattaa
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