Methylomonas sp. EFPC3: PL263_02755
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Entry
PL263_02755 CDS
T10335
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
meec Methylomonas sp. EFPC3
Pathway
meec03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
meec00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PL263_02755 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
meec03019
]
PL263_02755 (pnp)
03016 Transfer RNA biogenesis [BR:
meec03016
]
PL263_02755 (pnp)
Enzymes [BR:
meec01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
PL263_02755 (pnp)
Messenger RNA biogenesis [BR:
meec03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PL263_02755 (pnp)
Transfer RNA biogenesis [BR:
meec03016
]
Prokaryotic type
tRNA degradation factors
PL263_02755 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
OB_RRP5_4th
KH-I_KHDC4-BBP
KH_2
DUF6160
KH_SLS1_2
S1_2
Adeno_100
Tir_receptor_M
Motif
Other DBs
NCBI-ProteinID:
WFP50957
LinkDB
All DBs
Position
610281..612359
Genome browser
AA seq
692 aa
AA seq
DB search
MNPIRKQFQYGDRLVTLETGEIARQANGAVIIDVEGTTLLVTVVGKKESSGGDFFPLTVD
YQEKAFAAGKIPGGFFKREGRPSENETLISRLIDRPIRPLFPEGFTNEVQIIATVLSLNP
EIDTEAPAILGASAALAVSGLPFNGPLGAATIGYIDGQYVLNPTLPQLKESRLRLMVAGT
NKAVLMVESEADLLPEDVMLGAVLFGHEQMQVAINAINEFAAEAATPAIAWTAPADNEAL
KAAVAAEAEAQIKAAYQIPEKLARQDALSAIRSGVVEKLTAEGLYDEKAIRNVIETLEYN
IVRGAILNDRKRIDGRDLTTVRPITIRTGVLPRTHGSALFTRGETQALVVATLGTERDAQ
IIDALAGEYKDTFLFHYNFPPFSVGETGRTGSPKRREIGHGRLAKRGVQSVLPNMGEFPY
VLRVVSEITESNGSSSMASVCGSSLALMDAGVPIKAPVAGIAMGLIKEGDQFAVLSDILG
DEDHLGDMDFKVAGSENGVTALQMDIKIDGITPEIMKVALDQAKQGRLHILGEMNKALSC
SRETMSDFAPRIISFKIDPSKIREVIGKGGVTIRAITEQTGASIDLTDDGVVNIASVDKA
AGEEAKRMIEEITAEVEVGKTYEGKVVRLMDFGAFVTILPGKDGLVHISQISDERVEKVS
DKLSEGDVVKVKVLEIDRQGRVRLSMKEVDNN
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcctatcaggaaacaatttcagtacggcgatcgtctcgtcacgttagaaaccggc
gaaattgcccgtcaagccaacggcgcggtgattatcgatgtcgaaggcaccacgctgttg
gtgaccgtggtcggcaaaaaggaaagcagcggcggtgatttttttccgttgactgtcgac
tatcaagagaaagcctttgcggcaggtaaaattcccggcggatttttcaaacgcgaaggc
cgaccaagcgagaacgagacgctgatttctcgcctgatcgatcgtccgattcgtccactg
tttcccgaaggtttcactaacgaagtgcagatcattgctaccgtactgtcgttgaatcct
gaaatagataccgaagcgccggcgattctgggtgcttccgccgcactggccgtgtccggc
ctgccgttcaacggtccgttgggcgctgcgaccatcggttatatcgatggccagtacgtg
ttgaatccgaccttgccgcaactgaaagaatcgcgtttgcgcttgatggttgccggcact
aacaaagcggtgttgatggtggaatcggaagccgatttgttgcctgaagacgttatgctg
ggtgcagtattgttcggccacgagcaaatgcaggttgcaatcaacgcgatcaacgaattt
gccgccgaagccgccactccggcaatcgcttggactgctccggccgataacgaagccctg
aaagccgccgttgccgccgaagccgaagcgcaaatcaaagccgcgtaccaaattcccgag
aagttggcgagacaggatgcgctgagcgcaatccgtagcggcgtcgtggaaaaattgact
gcggaaggtctttacgacgaaaaagccattcgcaatgtgatcgaaactctggaatacaac
atcgtccgtggtgcaattctgaacgatcgcaaacgtatcgacggccgtgatttgaccacc
gtgcggccgattacgattcgtaccggcgtattgcccagaacccacggttctgcgttattc
acccgcggcgaaactcaggccttggtcgtcgcgactttgggtaccgagcgcgatgcgcag
atcattgacgcgttggctggcgaatacaaagacactttcctgttccactacaacttcccg
ccgttcagtgtgggcgaaaccggccgtaccggctcgccgaaacgccgcgagatcggtcac
ggtcgtctggcgaagcgcggcgtgcaatcggtgttgccaaacatgggcgaattcccttac
gttttgcgcgtggtatctgaaatcaccgaatcgaacggttccagctcgatggcctcggtt
tgcggtagcagtttggcgttgatggatgccggcgtgccgatcaaggctccggtggccggt
atcgcgatgggtttgatcaaagaaggcgaccagtttgccgtgttatccgatattctgggt
gacgaagatcacttgggcgatatggatttcaaagtggccggttctgagaacggtgtcacc
gctctgcaaatggacatcaagatcgacggcatcacgccggagattatgaaagtcgctctc
gaccaagccaagcaaggccgtttgcatattttgggcgagatgaacaaagcgctgtcctgc
tctcgcgagacgatgtcggatttcgcgccgcgcatcatcagttttaaaatcgatccgtcc
aaaatccgcgaagtcatcggtaaaggcggcgtgacaatccgggccataaccgaacaaacc
ggcgccagcatcgatttgaccgacgacggcgtcgtaaatatcgcctcggtcgataaagcg
gctggtgaagaagctaaacggatgatcgaggagattaccgcagaagtcgaagtcggcaaa
acctatgaaggcaaagtcgtgcgcttgatggatttcggggcctttgtcacgatcttgccg
ggcaaggacggtttggtacacatctcgcaaatttccgatgagcgggtcgagaaagtcagc
gataagttgtcggaaggcgacgtggtcaaggtcaaggtgttggaaatcgatcgccaaggc
cgggtgcgcttgagtatgaaagaagttgataacaactga
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