Methylomonas sp. EFPC3: PL263_03110
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Entry
PL263_03110 CDS
T10335
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
meec Methylomonas sp. EFPC3
Pathway
meec03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
meec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PL263_03110 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meec03400
]
PL263_03110 (xseA)
Enzymes [BR:
meec01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
PL263_03110 (xseA)
DNA repair and recombination proteins [BR:
meec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
PL263_03110 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
IL11
DHQ_synthase
Motif
Other DBs
NCBI-ProteinID:
WFP51026
LinkDB
All DBs
Position
complement(692545..693888)
Genome browser
AA seq
447 aa
AA seq
DB search
MTDSEAIYSVSELNRETKRLLANHFRTVQVQGEISNLSLPSSGHYYFTLKDAQAQVRCAM
FKGQQQRLRFKPANGDSVIATAQVSLYEPRGDYQLVVEHLAEAGDGALRLAFERLKQKLL
AEGLFDQERKKPLPTLPDCIGVITSASGAAIHDILSVLRRRFPAIPVLIYPVAVQGESAK
FEISAALAKANRNPQADVLILARGGGSLEDLWAFNEEIVARAIAASKIPVISAVGHEVDF
SIADFVADMRAPTPSAAAECVVPDANSLLGAFASFERQLQRLIQQKLLRQRQQLEWLEKA
LRSQHPGQKLQRNAQRLDELELRLQHAMQNRLAHARQQAAIREQRLYRNQPLAAINAQQR
QLQFFRQRLQAAVNGKIAGLKSRHAAAAQTLQAVSPLATLERGYAIVRRHGSAQVIKSVS
QLNSDDLLDTRLADGRIVSRITDITDG
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgaccgattccgaagctatctacagcgtttccgaactcaaccgcgaaaccaagcgcctg
ttggccaaccactttcgaaccgtgcaggtacagggcgaaatatccaacctgagcctgcct
tcgtctggccactattacttcacgttgaaagatgcccaggcccaggttcgttgcgccatg
ttcaagggtcagcagcaacgattacgtttcaaaccggccaatggcgactcggttatcgcc
accgcccaggtcagtttgtacgagccgcgcggcgattaccagctggtggtggaacatctg
gccgaagccggcgacggcgccttgcggcttgcgttcgaacgcctgaaacagaaactgctg
gccgagggtttgttcgaccaggaacgcaaaaaaccgctacctaccctgccggactgcatc
ggcgtgattacttcggccagcggcgccgcgattcacgatatcctcagcgtattgagacgg
cgttttccggcgataccggtcctgatttatccggttgcggtacagggcgagagcgctaaa
ttcgaaatcagcgcggcattggccaaagcaaatcgcaatccgcaagccgacgttctgatt
ttggcccgcggtggcggctcgctggaagacttatgggcgttcaacgaggaaatcgtcgcc
cgtgccattgccgccagcaagattccggtaatctccgccgtcggccacgaagtggacttc
agcatcgccgatttcgtcgccgacatgcgcgcgccgacgccgtcggcggccgccgaatgc
gtggtaccggatgcgaatagcttgctcggcgcatttgccagcttcgagcgccaactgcag
cgactgatacagcaaaaactactgcgtcagcgccagcagctggagtggctggaaaaagcc
ttgcgcagccagcaccccggccagaagctgcagcgcaatgctcaacgcctggacgaattg
gaactgcgcctgcaacatgcgatgcaaaaccggctggctcatgcccgccagcaagcggcg
atccgcgaacagcgcttgtaccgcaaccaaccgctggcggcaatcaatgctcagcaacgg
caattgcaatttttccggcaacggcttcaggctgcggtaaacggcaaaattgcagggtta
aaaagccgtcacgccgccgcagcgcaaaccctgcaggccgtcagcccactggccacgctg
gaacgcggctatgctatcgttcggcgccacggctcggcacaggtgatcaagtcggtaagc
cagctaaactccgacgatctgctcgatacccgcttggccgacggccgaatcgtcagtcgc
atcaccgatattaccgacggttaa
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