Methylomonas sp. EFPC3: PL263_04560
Help
Entry
PL263_04560 CDS
T10335
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
meec Methylomonas sp. EFPC3
Pathway
meec02020
Two-component system
meec02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
meec00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PL263_04560
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PL263_04560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
meec03000
]
PL263_04560
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
meec02035
]
PL263_04560
Transcription factors [BR:
meec03000
]
Prokaryotic type
Helix-turn-helix
Other families
PL263_04560
Bacterial motility proteins [BR:
meec02035
]
Flagellar system
Flagellar assembly proteins
Others
PL263_04560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
FleQ
HTH_8
AAA_5
AAA_16
AAA
bpMoxR
AAA_7
OKR_DC_1_N
TIP49
HTH_50
nSTAND3
AAA_2
AAA_30
DBI_PRT
HTH_30
DENN
Motif
Other DBs
NCBI-ProteinID:
WFP51300
LinkDB
All DBs
Position
1009764..1011176
Genome browser
AA seq
470 aa
AA seq
DB search
MALPEILLVDDNLNRAQQVETVLRFLEYRVITVSGNQYESVLAGQDAFGAVFVGSGDRQA
SLIKAIADATEDTPIILLAEPGNGQQLLSTIQQLVSKVVEWPTVYPTLIDILDELPKPES
TAHKPQTNKGLAGISKAVQKTRELIDQVAKSDATVLILGESGTGKEVVAQALHRASARRD
KPFVPVNCGAIPGELLESELFGHEKGAFTGALTSRQGRFEMAEGGTLFLDEIGDMPMPMQ
VKLLRVLQERTFERVGSNKTIRCDVRIVAATHRHLEQEIIEKRFREDLFYRLNVFPIEVP
ALRERAEDIPYLINDLIARMEAANRGSVSLTPRAVAVLMQHSWPGNVRELSNLIERLAII
SPDSPVDAGDLPEKFQAYEVPDTVQLQLPEPDIHVVRPAAREALAKPIQGQATVQLPEQG
IDLKEYLTDLENELIRQALEECNGVVAHAAKLLNMRRTTLVEKLRKVDAA
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggcattgccggaaattttgctggttgacgataaccttaatcgcgcacaacaagtcgaa
acggtgctccggtttttggaataccgggtgattacggtcagcggcaatcaatacgaatcg
gtattggccggtcaagatgctttcggtgcggtgtttgtcggtagtggcgatcgccaagcc
agcctgatcaaagcgatagccgacgcgacggaggatacgccgatcattctgctagcggag
cccggtaatgggcagcagttgctgagtactattcaacaattggtcagtaaagtcgtggaa
tggccgacggtctatccgacactcatcgacatattggacgaattgcccaaaccagaatcg
actgcgcacaagccgcaaaccaataaaggcttggccggaatcagtaaagcagtacagaaa
acccgcgaactgatcgatcaagttgccaaatccgatgcgaccgtactcattctcggcgag
tccgggaccggtaaggaagttgtcgcccaagccctgcatcgggcatccgcccgcagggac
aagccgtttgtgccagtcaattgcggagcgattccgggcgaactgttggaaagcgaattg
tttggccatgaaaaaggggcatttaccggagccttgacttcgcgccagggccgattcgag
atggccgagggcggtaccttatttctcgacgagatcggcgacatgccgatgccgatgcag
gtcaagcttttgcgcgtattgcaggaacggaccttcgaaagggtcggcagcaataaaacc
atccgctgcgacgtccgtatcgtcgccgccacccaccgccatctggaacaggagattatc
gaaaaacgttttcgggaggatttgttctaccggctgaacgtatttccgattgaagtgccg
gcgttgcgggagcgggctgaagacatcccgtatctgatcaacgatttgattgcccgcatg
gaagcggcgaaccgcggcagcgtcagcttaacgccgcgggcggtcgctgtcctgatgcaa
cacagttggccgggcaatgtgcgcgagttgtcgaatttgatcgaacgcttggcgatcatc
agcccggattcacccgtggatgccggcgacttaccggaaaaattccaagcgtacgaagtg
cccgacacggttcaattgcagctgccggaacctgatatccatgtggtccggccggccgca
cgcgaagcgttggccaagccgatacagggccaggctacggtgcaattgccggagcaaggc
atcgatttaaaggaatacttgaccgacttggaaaacgaactgatccgccaagccttggaa
gagtgcaatggcgtggtcgcccatgccgccaaattgctgaatatgcgcaggaccacgtta
gtggaaaaactgcgcaaagtggatgccgcctaa
DBGET
integrated database retrieval system
