Methylomonas sp. EFPC3: PL263_06965
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Entry
PL263_06965 CDS
T10335
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
meec Methylomonas sp. EFPC3
Brite
KEGG Orthology (KO) [BR:
meec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
meec03021
]
PL263_06965 (rapA)
Transcription machinery [BR:
meec03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
PL263_06965 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
AAA_34
Motif
Other DBs
NCBI-ProteinID:
WFP51762
LinkDB
All DBs
Position
complement(1542009..1544774)
Genome browser
AA seq
921 aa
AA seq
DB search
MNEFIPGQRWISNTESELGLGMVVEAEANRVTVLFLATGDRRVYAKDNAPLTRVQFSAGD
VIESVEYAKITVQQVQQHAGLLTYIGLDEDGQLQQVDEMELNHHIQFNKPQDRLFTGQFD
PTAWFLLRYETWRRQQQHQQSAVKGLQGARAALIPHQLYIAHQAANRSEPRIMLADEVGL
GKTIEAGLIIQHRLINGLSRRVLILVPESLMYQWLVEMLRRFNLRFSLFDESRCMSFADE
GNPFLHEQLILCSQQFFADFPERREQALDAGWDLVVVDEAHHLEWSAEAPSEEYLFVEQL
AAAAPGLVLLTATPEQLGKESHFARLRLLDPDRFYDFQQFLAEESQFEPVARLANLLIAG
ERLDAEQQALLQKLLQHDNVDNWLQQVNAEDGGAREELIKLLLDHHGTGRILYRNSRHTV
QGFPDRQRHAYPLQGEDSADLANSPYLHWLVAKLKALGDEKALLICKRADTAIQLEQLLR
HHVGHTAAVFHEGMSIVERDRAAAFFADEESRAQLLVCSEIGSEGRNFQFVRHLILFDLP
ENPDLLQQRIGRLDRIGQKHVIQIHIPYLVGSAQHVLYRWYEEGLDAFRHNCSGAAQVLK
LLGSELDQVLHGREPAAIETLLAKTRDLNSRVEEELHKGRDLLLELNSCRPQEAAHLVET
IYQNERDGSLWPYMEAMFDCYGVDVEDHSRDCYILWPSENLRIAHFPMLQDDGLTVTVDR
DIALAREDMQFLTAEHPMVLSAMDLVLSSETGNAAVSVVKHPQLKAGQFLLELLFVAECS
APAELQLGRFLPHTPIRILVDQNKQDLTAAVGHDSLTETGDSFDKLQVAQFLHSQRQHIQ
DMILVAERLAAAQMQRLVTESGNRMIAALTGEIKRLVRLKKINPGIKPQEIEQLKQKTML
SHECIQDTQLRLDAVRFVITS
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaatttattcccggccaacgctggatcagtaacaccgaatcggaactgggtttg
ggcatggtcgtcgaggccgaagccaatcgcgtcaccgtcttgtttttagcgaccggcgac
cggcgggtctatgccaaggacaatgcgccgctgacgcgggtccagttcagcgcaggcgac
gttatcgaatcggtggaatacgccaagatcacggtgcagcaggtacagcaacacgccggc
ctgctgacctatatcggcttggatgaagacggtcagttgcagcaagtcgacgaaatggaa
ttgaaccaccatattcaattcaacaagccgcaagatcgcttgtttaccggccaattcgac
ccgaccgcctggtttttgctgcgttacgagacctggcgccggcaacagcaacatcaacaa
tccgccgttaaaggcttgcagggcgcccgcgctgcgctgattccgcaccagttgtacatc
gctcaccaggccgcaaaccgctccgagcctcgcatcatgctggccgacgaggtcggtttg
ggcaaaaccattgaagccggtttgatcattcagcaccgcttgatcaacggactgagccgg
cgggtcttgattctggtgccggaaagcctgatgtaccaatggctggtagaaatgctgcgc
cgcttcaatttgcgtttcagcctgtttgacgagtcgcgctgcatgtcgtttgccgacgaa
ggcaatccgtttctgcatgagcaattgatcctgtgcagccagcagttcttcgccgacttt
cccgagcggcgcgagcaggcgctcgatgccggctgggatttggtcgtggtcgacgaggcc
caccatctggaatggagcgcggaggcgccgagcgaggaatatctgttcgtcgagcagctg
gccgcggcggcgccgggcttggtgttattgaccgctaccccggagcaattgggcaaggaa
agtcatttcgcccgcctgcgcctgttggatccggaccgtttttacgattttcagcaattt
ctggcggaggaaagccagttcgagccggtcgcccgtctggcgaatctgttgatagccggc
gaaagattggatgccgagcagcaagcgctgttgcaaaagttgctgcagcacgacaatgtc
gacaactggttgcagcaagtcaacgcagaagacggtggcgcgcgcgaagagttgatcaag
ctgttgttggatcaccatggtaccgggcggattttgtatcgcaattcgcggcataccgta
cagggctttcccgaccggcaacgccacgcctatccgttgcagggcgaggatagcgccgat
ttggccaacagtccttacttgcattggctggttgctaagttaaaagcgttgggtgacgaa
aaagccttgctgatttgcaaacgggccgacactgcgatccaattggaacagttgctacgg
caccatgtcggtcatactgcggcggtgtttcacgaaggcatgagcatcgtcgagcgcgac
cgcgccgccgcgtttttcgccgacgaagagagcagggcgcagctgttggtgtgttcggaa
atcggcagcgaaggccgcaatttccaattcgtgaggcatttgattctgttcgacttgccg
gaaaatccggatttactgcaacaacgcatcggccgcctggaccggatcgggcagaagcac
gtgattcagatccatatcccgtatctggtcggcagcgcccagcatgtgctctaccgttgg
tacgaggaaggtttggatgcgttcaggcacaactgttccggggccgcacaagtgttgaaa
ttgctcggcagcgaattggaccaggtattgcacgggcgcgaaccggccgccatcgagacg
ttgcttgccaaaacccgcgacttgaacagccgggtggaagaagaactgcacaagggccgc
gatttattgctggaactcaactcctgccggccgcaggaggctgcgcatttggtggaaacg
atctatcagaacgagcgggacggcagtttgtggccttacatggaggcgatgttcgattgt
tacggggtcgatgtcgaggaccattcccgggattgctacatcttatggcccagcgaaaac
ttgcgcatcgcccattttccgatgctgcaggacgacggcctgaccgtcacggtcgaccgc
gacatcgccttggcccgcgaggacatgcagtttctgacggctgagcatccgatggtgttg
tcggcgatggatttggtattgtccagcgagaccggtaacgcggcggtcagcgtggtcaaa
catccgcagttgaaagccggccagtttttgttggagctattgttcgtggccgaatgcagc
gcaccggccgaattgcagctcggtcggtttttgccgcacacgccgatccgcatcctggtc
gaccaaaacaaacaagatctgacggcggccgtcggccacgatagtctgaccgagaccgga
gacagcttcgataagctgcaggtcgcccagtttttgcacagccagcgccagcacattcag
gacatgatcctggtggccgagcggctggctgcggcacagatgcaaaggttggttaccgag
agcggcaaccggatgatcgcggccttgaccggcgagatcaagcggctggtgcgcttgaaa
aagatcaatccgggtatcaaaccgcaagaaatcgaacaactgaaacagaaaaccatgctg
tctcacgaatgcatccaggatacccagttacggctggatgcggtgcggttcgtgattacc
agttag
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