Methylomonas sp. EFPC3: PL263_07320
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Entry
PL263_07320 CDS
T10335
Symbol
nifA
Name
(GenBank) nif-specific transcriptional activator NifA
KO
K02584
Nif-specific regulatory protein
Organism
meec Methylomonas sp. EFPC3
Pathway
meec02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
meec00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PL263_07320 (nifA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
meec03000
]
PL263_07320 (nifA)
Transcription factors [BR:
meec03000
]
Prokaryotic type
Helix-turn-helix
Other families
PL263_07320 (nifA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
HTH_8
GAF_2
AAA_5
AAA
Mg_chelatase
AAA_2
GAF_3
bpMoxR
Motif
Other DBs
NCBI-ProteinID:
WFP51832
LinkDB
All DBs
Position
1614919..1616445
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AA seq
508 aa
AA seq
DB search
MTERLLLVESELDTLYMVSQLLNSTHELRSKLKGILEILHKRSGLRFGMITLRDIEDDSM
GICEIYGEGIDRSVRYQPGEGLVGAILDEGSTIVVERIADEPRFLSRLGLYDPDLPFIGS
PLAVEQGEVVGILAAQPCDATFLGERARFMEMVANLIAHSVNMLRVMERKQNELLNERDY
LKQTLVKNYRFENIIGHSEPMLKVFDIIRQVAKWHTTVLIRGESGTGKEVVASSIHFNSA
CANGPFLKLNCAALPDTLLESELFGHEKGAFSGAIGQRKGRFELADGGTLFLDEIGEISA
SFQAKLLRVLQEGEFERVGGVRTLKVNVRIIAATNRNLEQEVADGNFREDLYYRLNVMPI
NMPPLRERIEDIPELSAFLLNRISKQQGGRPLEIKESAIRILMKHDWPGNVRELENRLER
AAIMSADGTIDRDVIASTGLENEIGISRTPQSIKHIDLHDESMDERERVIAALEQSGWVQ
AKAARLLDMTPRQIAYRIQTLNINVKQI
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgactgaacgattattactggtcgaatcggagctggatacgctctacatggtcagccag
ttgctgaacagcacccacgagttacgcagcaaactcaaaggcattctggagattttgcac
aaacgtagcggcttgcgcttcggcatgatcaccctgcgcgacatcgaagacgacagcatg
ggcatctgcgagatatacggcgaaggcatcgaccgctcggtacgttaccagcccggcgaa
ggcctggtcggggcgattttggatgaaggcagcacgattgtagtcgaacgcatcgccgac
gaaccgcggttcctgagccgcttggggctttacgatccggacctacccttcatcggctcg
ccgctggcggtggaacaaggtgaagtggtcgggattctggccgcccaaccctgcgacgcc
acgtttctgggcgaacgtgcccgcttcatggaaatggtcgccaacctgatcgcgcatagc
gtcaacatgctgcgggtgatggaacgcaaacaaaacgagctgttgaatgaacgcgattat
ctgaagcagaccctggtcaaaaactatcgcttcgaaaacatcatcggccactccgaaccg
atgttgaaggtgttcgacatcattcgtcaggtggcgaaatggcataccacagtgctgatc
cgcggcgaatccggcaccggtaaggaagtggtcgccagctcgatccatttcaattcggcc
tgcgccaacggcccgtttctgaagctgaactgcgccgcgctgccggacaccttgctggaa
tcggaattgttcggccatgaaaaaggcgccttcagcggcgcgatcggccaacgcaaaggc
cgcttcgagttggccgacggcggcacgctgttcctggacgaaatcggcgagatctcggcg
tcgttccaggccaagttgctgcgagtactgcaggaaggcgagttcgaacgggtcggcggc
gtgcgcacgctgaaagtcaacgtccgcatcatcgccgcgaccaatcgcaatctggagcag
gaagtggccgacggtaatttccgcgaggacttgtattaccggctcaacgtcatgccgatc
aacatgccgccgttgcgggagcggatcgaggacatcccggaactgtcggcctttttattg
aaccggatctccaaacaacagggcggccggcccctggaaatcaaggaaagtgcaatccgc
atcctgatgaaacacgactggcccggcaacgtccgcgaactggaaaaccggctggaacgc
gccgcgatcatgagcgccgacggcactatcgaccgcgacgtgattgccagcaccggtctg
gaaaacgaaatcggcatcagccgcacgccgcaatcgatcaagcatatcgatctgcacgac
gagagcatggacgagcgggaacgggtgattgccgcgctggagcaaagcggctgggtacaa
gccaaggcggcccgcttgctggacatgacgccgcggcaaatcgcttaccggatccaaacc
ttgaatatcaacgtcaaacaaatctaa
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