Methylomonas sp. EFPC3: PL263_08535
Help
Entry
PL263_08535 CDS
T10335
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
meec Methylomonas sp. EFPC3
Pathway
meec03420
Nucleotide excision repair
meec03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
meec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PL263_08535 (uvrD)
03430 Mismatch repair
PL263_08535 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meec03400
]
PL263_08535 (uvrD)
Enzymes [BR:
meec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PL263_08535 (uvrD)
DNA repair and recombination proteins [BR:
meec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PL263_08535 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
PL263_08535 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
WFP52060
LinkDB
All DBs
Position
1905682..1907844
Genome browser
AA seq
720 aa
AA seq
DB search
MDVSSIIAPLNDQQRLAVSAPSQAMLVLAGAGSGKTRVLVHRIAWHIKINHVSPYHILAV
TFTNKAANEMRGRIEDLLNTSARSMWIGTFHGLAHRLLRQHAKQAKLPETFQVMDSDDQL
RIVKRLIKNLNLDDSKWPPKQAQWFINGQKDEGIRARHMQDRGDFYLRQMRQIYLAYEEL
CDRSGLVDFAELLLRAHELLRDNADLLSFYRERFQQVHVDEFQDTNTIQYAWLRLLTEGN
NNLFVVGDDDQSIYGWRGAKIENIYAFQKHYPQHGVIRLEQNYRSSGHILKAANTLIANN
DNRMGKELWTDAGDGHALALYSAFNEQDEAYFVVEKIRQWVRDGGLRSETAILYRSNAQS
RQFEERLMTTATPYRVYGGLRFFERMEIKNALAYLRLSSNPHDDASFERVVNTPTRGIGA
KTLDDMRLLAREKQLSLWQAAQAMLEQNQLPARAANALRGFMNLVLELGRATQDWSLHET
VKHIVETSGLIELYKKEKQDKGEARLENLEELVNAARLFDYDRDNAENLSELDMFLAHAA
LEAGEMQGEADEDCVQLMTLHSAKGLEFKLVFLVGMEEGLFPSQQALDDPGRLQEERRLC
YVGITRAMQQLYLTHAESRRLYGKDSYPRASRFLRELPQESIQEIRLRANVTRPAAAAPS
ASATLGGGSFKLGQTVRHEKFGEGVVLQTEGEGDQERVQINFRNAGLKWLMLAYAKLDRL
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggatgtctcttctatcattgccccgttaaacgaccagcaacgtctggccgtttcggcc
ccttcccaagccatgctggtgctggccggcgccggtagcggcaaaacccgggtgctggta
caccgcatcgcctggcatatcaagatcaaccacgtctcgccctaccacatcctggcggta
acctttaccaacaaggccgccaacgagatgcgcggccggatcgaggatttgctgaacacc
tctgcccgctcgatgtggatcggcacttttcacggtctggcccaccgcttgctcagacaa
catgccaagcaagccaaactgccggaaacgtttcaagtgatggacagcgacgaccaattg
cgcatcgtcaaacgcctgatcaagaatctgaacctggacgacagcaaatggccgccgaag
caagcgcaatggttcatcaatgggcaaaaggacgaaggcatccgcgcccgccacatgcag
gacaggggcgatttttacctgcggcagatgcgccagatctatttggcttacgaggaactg
tgcgatcgctccggcttggtcgatttcgccgaactgctgctccgcgcccacgaactgctg
cgcgacaatgccgatttattgagcttttaccgcgagcggttccagcaagtccacgtcgac
gagtttcaggacaccaacaccatccaatacgcctggctgcgattactgaccgaaggcaac
aacaacctgttcgtggtcggcgacgacgatcaatcgatttacggctggcgcggcgccaaa
atcgaaaatatctacgccttccaaaaacactatccgcaacatggtgtgatccgcctggaa
cagaactaccgctccagcggccacattctgaaagccgccaacacgctgatcgccaacaac
gacaaccggatgggcaaggaattgtggaccgacgccggcgacggccacgctctggccttg
tactcggcgttcaacgaacaggacgaagcctatttcgtcgtcgaaaaaatccggcaatgg
gtgcgcgacggcggcctacgcagcgaaacggcgattttgtaccgttccaacgcccaatcc
cgccagttcgaagaacgtttgatgaccaccgccaccccataccgggtttacggcggcctg
cgctttttcgaacggatggagatcaagaacgccctcgcctatctgcgtttgtccagtaac
ccgcacgacgacgcctcgttcgaacgggtcgtcaatacgccgacccgcggcatcggcgcc
aaaaccctggacgacatgcgactcctggcccgcgaaaagcaattgtccttgtggcaggcg
gcgcaggccatgctggaacaaaaccagttgccggcccgtgccgccaacgcgctgcgcggc
ttcatgaatctggtgcttgagctgggccgggctacacaagattggagtctgcacgaaacc
gtcaaacatatcgtcgaaaccagcggcctgatcgaactgtataaaaaggaaaagcaggat
aaaggcgaagcccggttggaaaacctggaagagttggtcaacgccgcccgattgttcgac
tatgatcgcgataatgcggaaaacctgtctgagctggacatgtttctggcccacgccgcg
ctggaagccggcgaaatgcaaggcgaagccgacgaggattgcgtgcagttgatgacgctg
cattccgccaagggcctggagttcaagctggtgtttctggtcggcatggaagaaggcctg
tttccgtcgcaacaggcactggacgatcccggccggttacaggaagaacgcagactatgc
tatgtcggcatcacccgcgccatgcaacaactctatttgacccacgccgaatcgcgccgc
ctgtacggcaaagacagctatccgcgggcctcgcgctttttgcgcgaactgccgcaggaa
tcgatacaggaaatccgcttgcgcgccaacgtcacccgccctgccgccgctgcgccgtcg
gcatccgccactctgggcggcggcagcttcaaactcggccaaaccgtccgccacgagaaa
ttcggtgaaggcgtcgtgctgcaaaccgaaggcgaaggcgatcaagagcgggtacaaatc
aatttccgcaacgccggcttgaagtggctgatgttggcttatgccaaattagacaggcta
taa
DBGET
integrated database retrieval system
