KEGG   Methylomonas sp. EFPC3: PL263_12940
Entry
PL263_12940       CDS       T10335                                 
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
meec  Methylomonas sp. EFPC3
Pathway
meec03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:meec00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    PL263_12940 (tssM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:meec02044]
    PL263_12940 (tssM)
Secretion system [BR:meec02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   PL263_12940 (tssM)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical
Other DBs
NCBI-ProteinID: WFP49012
LinkDB
Position
complement(2883901..2887458)
AA seq 1185 aa
MERIFNFFKHKWVLELIGILFLSLMIWFIGPLVAIAGVAPLESELARGITIGVLVFVWLI
YRLLAYRFSQQRDHKLMADLAGKEGNDSANDTEAAATAELDILGRGFEQALALLKTSGGK
QQRSTQFLYEMPWYAIIGAPGSGKTTALINSGLHFPLAERLGTHSVKGVSGTRDCDWWFS
DEAILLDTAGRYTTQDSHKEVDASAWQGFLLLLKKYRPRRPLNGVFVAVSVSDLMQQSEE
ELRQHAAAVRRRIMELNDRLGVQLPVYVLFTKADLIAGFNDFFANLTEDERSQVWGETFL
RTEMATDNPAEHIQQFGRGYDELIERLTQRRLKRMQEERDVQRRAAIFDFPQQMMLFKTV
ATDFLQATFSTNRYEEPFLLRGVYFSSGTQEGTPIDRIMSALAASFRLERQAVPLLSGRG
KSYFLTKLLKQVVFPEADLVGTDPRVERRYRLMTFAAYGATFAFVAIATIVWSISFTANK
MAIADVDKQIEAYRASNIVAQDARSGFLALLPKLNALQAAGDVYRQAGWSTGFGLDQGDK
IGSGVDMAYQRLLREGFAVQIVQRLQQRMQSDEGSNLDVLYQLLRVYLMFGEPQRMDVKV
AQPWIKLDWEQMFATDPETQAKLQTHLDNLLALPLDPAAIDNNFVGAVRNKLSQIPLVNQ
VYSRFKSEALFDHSHDLIVAAQLAPNGGRVFVAANGKELDSIVVPGVFTAYGYTELFLKK
GMSYVKEASEQNWVLGVETGNSLTEIDRLYGDFKRLYLADYQKAWDGVLAAVKFRPQAGT
SQLVDTLDLLSRPDSPLKLLLELVEKNTSLSKLSADLADSLSKAAGAVAVPEAATQKLLA
MAKQNEQGIDPVKALEAYFEPFNAQVRGGADRPAPIASALSSIKNLHDYLMQIGSASNAG
GQALSTEAAKAAGGGIDPLQAAKMEFARLPGPIAASLNALTATGGQQIKSGAKNQLNEML
KTAVAIPCKAALSGRYPFAKNTPQDVLLADFGKVFAANGIVDQFFNANLKPFVDIAAVQW
QELKSDNALGLAPASIRQFQIAAKIRDAFFPGGGAVPQVQFELKPLSLDDRVGTFRLNVE
GQELVYRHGPEQLTKFQWPGSNNSAGVRVVFETLDGKQVSRAKDGAWALFRMFDEFNIEP
TGLPDRFNLTVQVEGLSARFELHAASVNNPFGISEYQSFRCPEAL
NT seq 3558 nt   +upstreamnt  +downstreamnt
gtggaacggatattcaatttcttcaaacataaatgggtgttggaactgatcggcatactg
ttcctatcgctaatgatctggtttatcgggccgctggtggcaattgccggtgtcgcgccg
ttggaatctgaattggccagaggaataacgatcggggtattagtatttgtctggctgatt
tatcggctattggcctaccgcttctcgcaacaacgcgaccataagctgatggccgatttg
gccggaaaggagggcaatgatagtgctaacgatacggaagccgccgccaccgcagagttg
gatatcttaggccgaggttttgaacaagcgttagcgttgttgaaaactagtgggggtaag
caacagcgaagtacccaatttctgtacgaaatgccttggtatgcaattatcggtgcgccg
gggtccggtaaaacgacagcattgatcaattccggtttgcacttcccgttggccgagcgt
ttgggtacgcattcggtgaaaggcgtcagcggtacccgcgattgcgattggtggttttcc
gacgaagcgatattgctggataccgccggccgctacaccacgcaagatagtcataaagag
gtggatgcgtccgcttggcagggtttcctgctgttgcttaaaaaataccggccgcgccgg
ccattaaacggcgtattcgtcgcggtcagcgtcagcgacttgatgcaacagtcggaagaa
gaattgcggcagcatgcggcggcggtcaggcgccggatcatggagttgaacgaccgcttg
ggtgttcagttaccggtttacgtgttgtttaccaaagccgacttaattgcaggttttaac
gactttttcgccaacttgaccgaagacgaacgcagccaagtatggggcgaaacttttctg
cgtaccgaaatggccaccgacaatccggccgaacacatccagcaattcggacgtggttac
gacgagttgattgagcgactgactcagcggcgtctgaaacggatgcaggaagaacgtgat
gttcagcggcgagcggccattttcgatttcccgcagcaaatgatgctgttcaaaaccgtt
gctaccgattttttgcaggctacgttttccaccaatcgttatgaagaaccgtttctattg
cgcggcgtgtacttcagcagcggcacccaggaaggcacccctatcgaccgcatcatgtcg
gcgctggccgccagttttagactcgagcgccaagcagttcctttattgagtggccgcggc
aaaagttattttctgaccaaattgttgaaacaggtggtgtttccggaagcggacctggtc
ggcaccgatccgcgggtggagcgccgatatcgcctgatgacgtttgccgcctacggcgct
acctttgcgtttgttgcaatcgccaccattgtttggtcaatcagttttaccgccaataaa
atggcgatagccgacgtcgacaaacaaatcgaagcctaccgtgccagtaatatcgtcgct
caagacgcccgaagcggatttttggccttgttgccgaagctaaacgcactgcaggcggcg
ggcgatgtttatcgccaagccggctggagtacaggttttggattggatcaaggcgacaag
atcggctccggtgtggacatggcctaccagcgcttgttgagggagggctttgcggtacag
atcgtccagcgcttgcaacaacgcatgcagagcgacgaaggtagcaacctggatgtgtta
taccagttattgcgagtttatctgatgttcggcgaaccccaacggatggatgtcaaggtg
gctcagccctggatcaagctggattgggaacaaatgttcgccaccgatccggaaactcaa
gcgaaattgcagacccatttggataatttgctggctttgccgttggatcctgccgcgatc
gataacaactttgtcggcgcggttcgcaacaaactgagccaaataccgttggtcaatcaa
gtctacagtcgctttaaaagcgaggctttgtttgaccatagccacgatttgatcgttgcc
gcccaattggcgccaaatggcggccgggttttcgttgcggccaatggcaaagagttggac
tcaatcgtggtgcccggggtgttcaccgcttatggctataccgagctgtttttgaaaaag
ggtatgtcttacgtcaaggaagccagcgaacagaactgggtattgggtgtcgaaaccggc
aattccttgaccgaaatcgaccgcttgtacggcgatttcaaacggttgtatctggccgat
tatcaaaaagcctgggatggcgtcttggccgcggtcaaattccggccgcaagccgggacc
agccagctggtcgacacactggatctgttgtccagaccggactcgccgttgaaattgttg
ctggagttggtcgaaaaaaatacttcactgagcaaactctcggcagacttggccgacagc
ctgagcaaagccgccggcgctgtcgcggtgccggaggccgctacccagaaattgttggcg
atggccaaacagaacgagcaaggcatcgatccggttaaagcgttagaagcttatttcgag
ccgtttaacgcgcaagtgcgcggcggtgccgaccgtccggcgccgatcgcttcggcgctc
tccagtattaaaaatctgcatgactatttgatgcaaatcggctcggccagcaatgccggc
ggccaggctctatccaccgaagctgccaaagccgcaggcggcggcattgatccgctgcag
gcggcgaagatggaattcgcccgcttaccggggcctattgcggcctctttaaacgccttg
accgccactggcggtcaacaaatcaagagcggtgcaaaaaaccagctcaacgaaatgttg
aaaaccgccgtagcaattccctgtaaggctgccttgtccggccgctatccatttgcgaaa
aatacgcctcaggatgtgttgttggccgattttggcaaggtgtttgcggctaacggtatc
gtcgaccagtttttcaatgccaatttgaaacctttcgtcgatattgccgctgtgcagtgg
caagaacttaaatccgataacgctctgggcttggccccggccagcattcgccaattccag
attgccgccaaaatccgcgatgcgtttttcccgggtggcggtgccgtgccgcaagtccag
tttgaattgaagccgctgtccttagacgaccgggtcgggactttccggctgaatgtcgaa
ggccaggaattggtctatcgccacgggccggaacagctgactaaatttcaatggccggga
agcaataacagcgccggagtgcgagtggtattcgaaaccctggacggcaaacaagtcagc
cgtgccaaagacggggcctgggcgctgtttcgtatgtttgatgaattcaacattgagccg
acaggcctgcctgaccgcttcaatctgaccgtgcaagtagaaggcctcagcgcccgtttc
gaattgcacgccgcgagcgtaaacaatccgttcggcattagcgaataccaaagcttccgc
tgcccggaggccttgtga

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