Methylomonas sp. EFPC3: PL263_14265
Help
Entry
PL263_14265 CDS
T10335
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
meec Methylomonas sp. EFPC3
Pathway
meec03030
DNA replication
meec03410
Base excision repair
meec03420
Nucleotide excision repair
meec03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
meec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PL263_14265 (polA)
03410 Base excision repair
PL263_14265 (polA)
03420 Nucleotide excision repair
PL263_14265 (polA)
03440 Homologous recombination
PL263_14265 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
meec03032
]
PL263_14265 (polA)
03400 DNA repair and recombination proteins [BR:
meec03400
]
PL263_14265 (polA)
Enzymes [BR:
meec01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PL263_14265 (polA)
DNA replication proteins [BR:
meec03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PL263_14265 (polA)
DNA repair and recombination proteins [BR:
meec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PL263_14265 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PL263_14265 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
DNA_pol_lambd_f
HHH_5
Motif
Other DBs
NCBI-ProteinID:
WFP49259
LinkDB
All DBs
Position
complement(3180739..3183468)
Genome browser
AA seq
909 aa
AA seq
DB search
MSDSAIHKLILVDGSSFLFRAFHAVPPLTNSKGEPTNAVYGVSNMLRKLINDYNTPYFAV
VFDAPGKTFRHELYDQYKAHRPPMPDELRVQIQPLHDLIRSLGLPLIIEHGVEADDVLGS
LAQNAARQGFNVIISTGDKDMAQLVNEQIILENSMTGAVMDIAGVQDKFGVKPEQIIDYL
ALMGDAVDNIPGVPKVGPKTAAKWLQEYGTLDNLIASADQIKGKIGDNLREALGQLPLSR
ELTTIKCDVALHYSLDDLKRKEPDIAALKQQLGSLGFSSWLKTLNGDASATAAEPVGQAA
APKPAPVAKDYQTILSQAEFDAWLARLEQAELFAFDTETSSLNYSEAEIVGVSFAIEAGQ
AAYLPLAHDYPDAPAQLDRQSVLQALKPLLESPDRAKLGQNLKYDAHVLANHGIALRGIR
HDTMLQSYVLNSTATKHNMDDLAKHYLGVDTIHFEDVCGKGAKQIGFADVAIDRATEYAA
EDADITLRLHQTLSAELQQRPSLWALYNDIELPLVKVLAKIEENGVLIDSDMLAQQSQEL
ADRMIGLEIQAHDLAGSAFNLGSPKQIQEILYDRLNLPVLKKTPKGQPSTDESVLQELAV
DFALPRLILEHRGLSKLKSTYTDKLPQQINRKTGRVHTSYHQAVAATGRLSSTDPNLQNI
PIRSEEGRKIRQAFIAPSGYKIVAADYSQIELRIMAHLSGDAGLLKAFAAGEDVHRATAA
EVFEVAPDQVTHDLRRSAKAINFGLIYGMSAFGLAQQLGLPRNQAQSYIDLYFSRYPGVK
HYMDSTRELAKQQGYVETLFGRRLYLPDINARNAAQRQYAERTAINAPMQGSAADIIKRA
MIACHDWIETSGADLKMIMQVHDELVFEVAESILTDSIAKITGIMSAAAELAVPLLVEAG
TGANWDEAH
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atgtccgattccgccatccacaaactgattctcgtcgacggttcgtcgtttctgtttcgc
gcctttcacgccgtaccgccgctgaccaacagtaaaggcgaaccgaccaacgccgtttac
ggcgtctccaacatgttgcgcaagctaatcaacgactacaacacgccttactttgctgtg
gtattcgacgcgccgggcaagaccttccgtcacgagttgtacgaccaatacaaggcccat
cggccgccgatgccggacgaattgcgggtgcagattcaaccgctgcacgacttgatccgg
tctttgggattgccgctgatcatcgaacacggggtcgaggccgacgacgtgctgggcagt
ctggcgcaaaacgcggcccgccagggcttcaatgtcatcatttccaccggcgacaaggac
atggcgcaattggtcaacgagcagatcattctggaaaactcgatgaccggcgcggtgatg
gacattgccggggtgcaggacaaatttggcgtcaaaccggaacaaattatcgattatctg
gccttgatgggcgatgcggtggacaacatccccggcgtgcccaaggtcggaccgaaaacc
gccgccaaatggctgcaggaatacggcacgctggacaacctgatcgccagcgccgaccaa
atcaagggcaagatcggcgacaacctgcgcgaggccttgggccaattgccgctatcgcgg
gaactgaccacgatcaaatgcgacgtggccttgcattacagcctggacgacctgaaacgc
aaggaaccggatatcgccgcgttgaaacagcagctgggcagtctgggcttcagcagttgg
ttgaaaacgctgaacggcgacgcctcagcgactgcagccgaaccggtcgggcaagccgca
gcgccgaaaccggcgccggtcgcaaaagattaccaaaccatcctcagccaagccgaattc
gatgcctggctggcccggctggaacaagccgagctgttcgcgttcgataccgaaaccagc
agcctgaattacagcgaagccgagatcgtcggcgtttcgtttgcgatcgaagccggccaa
gccgcgtatttaccgctggcgcacgattacccggacgcgccggcgcaactggatcggcag
agcgtgctgcaggccttgaaaccgctgctggaaagcccggaccgcgccaaactcggccaa
aacctgaaatacgacgcccacgtcctggccaaccacggcattgcgttgcgcggtatccgc
cacgacacgatgctgcaatcctatgtgttgaacagtaccgcgaccaaacacaatatggac
gacctggccaaacattacctcggcgtcgataccattcatttcgaggacgtttgcggcaag
ggcgccaagcagatcggttttgccgacgtggcgatcgaccgcgccaccgaatacgccgcc
gaagacgccgacatcaccttgcgcctgcaccagaccctgtccgccgaattgcagcaacgg
cccagtttgtgggctttgtataacgatatcgagctgccgctggtcaaagtgctggccaaa
atcgaggaaaacggcgtgctgatcgacagcgacatgctggctcagcaaagccaggaattg
gcggaccggatgataggcctggagatccaggcccacgatctggccggctcggcttttaac
ctgggttcgccgaagcagattcaggaaatcctgtacgaccggctgaatctgccggtattg
aaaaaaaccccgaaaggccagccgtcgaccgatgaatcggtattgcaggaattggcggtg
gattttgcgttaccgcggctgattctggaacaccgtggcctgagcaaattgaaatcgact
tacaccgacaaactgccgcagcagatcaaccgcaaaaccgggcgggtgcatacctcctac
caccaggcggtggctgcgaccgggcggttgtcgtcgaccgaccccaatctgcagaacatt
ccgatccgtagcgaggaaggccgcaaaatccgccaagcctttattgccccgtccggctat
aaaatcgtcgcggccgattattcgcagatcgaattgcgaatcatggcgcatttgtccggc
gacgccggtttgctgaaagcctttgccgccggcgaggacgtgcaccgcgccacggccgcc
gaagtgttcgaagtggcgccggatcaggtcacccacgatttgcgccgctcggccaaggcg
atcaacttcggcctgatttacggcatgtcggccttcggcttggcgcagcaattgggcttg
ccgcgcaatcaggcccagtcttacattgacctgtatttcagccgttaccccggcgtcaag
cactacatggacagcacgcgggaattggccaagcagcaaggctatgtcgaaaccctcttc
ggccgccgtctgtatttgccggacatcaacgcccgcaacgccgcgcaacgccagtacgcg
gaacgcaccgcgatcaacgcgccgatgcagggtagcgctgccgacatcatcaaacgggcg
atgatcgcctgccacgactggatcgaaaccagcggcgccgacctgaaaatgatcatgcag
gtgcacgacgaactggtgttcgaagtggccgagtccattctcacggacagcatcgccaaa
atcaccggcatcatgtccgctgccgccgagttggccgtgcccttgctggtggaagccggc
accggcgccaactgggacgaagcgcattag
DBGET
integrated database retrieval system
