Methylomonas sp. EFPC3: PL263_17190
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Entry
PL263_17190 CDS
T10335
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
meec Methylomonas sp. EFPC3
Brite
KEGG Orthology (KO) [BR:
meec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
meec03009
]
PL263_17190 (rimO)
Enzymes [BR:
meec01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
PL263_17190 (rimO)
Ribosome biogenesis [BR:
meec03009
]
Prokaryotic type
ribosomal protein modification factors
PL263_17190 (rimO)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
YajR_YAM
TRAM
Motif
Other DBs
NCBI-ProteinID:
WFP49822
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Position
3803803..3805113
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AA seq
436 aa
AA seq
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MTNPRVGFISLGCPKALVDSEQILTRLRTEGYQVSPNYKDSDLVIVNTCGFIDAAVEESL
DSIGEALAENGRVIVTGCLGARQDEILARHPQVLKITGAHATDEVLDAVHEHLPPAHNPF
LELLPPQGIKLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIDDVMAEAERLAAAG
VKELLIVSQDTSAYGLDLHYQSRAWRGRDYQTRFKDLAAALGELGIWVRMHYVYPYPHVD
DVVPLMADGKILPYLDIPFQHASSRILKLMKRPAAAENNLERILAWRNICPDLTIRSTFI
VGFPGETEQEFEELLQFLSEAQMDRVGCFAYSPVKGAAANALPDAVPEQVKQERLARFME
HQAAISAERLQRRIGCRETVLIDEVVEEGAVARSRSDAPEIDGQVFIDGASHLQVGSFVD
VEIEDADDYDLWAKLV
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgactaatccgcgtgttggttttatcagtttgggttgcccgaaagcgctggtcgatagc
gagcagattttgacccgcttgcggaccgagggctaccaagtttcgccgaattacaaggat
tccgatctggttatcgtcaatacttgcggctttatcgatgccgcggtggaagagtcgctg
gacagcatcggcgaagctttggccgaaaacggcagggtgatcgtcaccggttgtctgggg
gcgcggcaggacgagattctggcccgccatccgcaagtgctgaaaattaccggcgcccat
gccaccgacgaggtgctggacgcggtacacgaacacttgccgccggcgcacaatcccttc
ctggagctgttaccgccgcaaggcatcaaattgacgcccaagcattacgcctacttgaag
atttcggaaggctgcaaccaccgctgtaccttttgtatcattccgtcgatgcgtggcgac
ctggtcagccggccgatcgacgacgttatggccgaggcggaacgcctggctgccgccggc
gtaaaagagctgttgatcgtatcgcaggataccagcgcttatggcctggatttacactac
caaagccgggcttggcgcggccgcgactaccaaacccgtttcaaggatttggcggcggca
ttgggcgagctgggaatttgggtgcggatgcattacgtctatccctatccgcacgttgac
gatgtggtgccgctgatggccgacgggaaaattttgccgtatctggatattccgtttcaa
catgccagcagccgaattttgaagctgatgaagcggccggctgcggcggaaaacaatctg
gagcgtatccttgcctggcgcaacatttgtcctgatttaaccattcgtagcaccttcatc
gtcggtttccccggtgaaaccgagcaggagttcgaagagctgttgcagtttttgagcgaa
gcgcaaatggatcgggtcggttgttttgcctattcgccggttaagggcgcggcggcaaac
gcgctgccggatgcggtgccggaacaggtcaagcaggagcggttggcgcggtttatggag
catcaggctgcgatcagcgccgaacgcttacagcgacggataggatgccgtgagaccgtc
ttgatcgacgaggtcgtcgaagaaggggcagtggcgcgcagcagaagcgatgcccccgaa
attgacggccaagtcttcatcgacggcgcaagccacctgcaggttggaagcttcgtcgac
gtcgaaatcgaagacgccgacgactacgacctgtgggccaaactggtctaa
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