Methylomonas sp. EFPC3: PL263_18260
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Entry
PL263_18260 CDS
T10335
Name
(GenBank) extracellular solute-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
meec Methylomonas sp. EFPC3
Pathway
meec02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
meec00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PL263_18260
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
meec02000
]
PL263_18260
Transporters [BR:
meec02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
PL263_18260
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
WFP50024
LinkDB
All DBs
Position
complement(4022308..4023345)
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AA seq
345 aa
AA seq
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MAPRFRFAATIAVMAIICALCPATAAATEVLRVLAWDGYADTDTVREFEYRYAAKVEVTY
ANSDDDLWYKINHAAYDVFAVNTAELQRYIDRNLVQALDPSRLTNHARQLPRFRDLAAIP
GLVRQEQVFAIPYTYAEMGLIYNRKIIAEPPQSMAAMWDPAYRGRVLAFNTSDHNFSLVG
LLLGAANPFRLSDGNLTEAARELAKLRRNVLTFYSTAEQAVQLFMRHDVALVFGNYGSQQ
LKALRDAGADVGYQIPQEGALAWLDCWAITRNARNPALAEQWIDYTLEPTVSERLSARHG
LANTISAHPDTESGQKLIWLEPVANPDLQKQLWDRVISGEPPEAF
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggcaccacgctttcgattcgccgccaccatcgctgttatggcgattatttgtgcgctc
tgcccagcgaccgcagcggcaacggaagtcttgcgagtgttggcctgggacggttatgcc
gacaccgatactgtccgcgaattcgaataccgctacgccgccaaggtggaagtgacttac
gccaattccgacgacgacctgtggtataagatcaaccatgccgcctacgacgtgtttgca
gtcaacacggccgaactgcagcgctatatcgaccggaatttagtgcaagcgctcgatccc
agccggcttaccaatcatgcccggcaactgccgcgttttcgcgatctggcggcaattcca
ggtttggttcggcaggagcaggtgttcgcaattccctacacctatgcggaaatgggcttg
atctacaaccgcaagatcattgccgaaccaccacaatcgatggccgcaatgtgggaccct
gcctaccgtggccgggtcctggcatttaacaccagcgaccataatttctcgttggtcgga
ctattgctgggcgccgccaatccgtttcgactctcagatggcaatctgaccgaagccgcg
cgcgaactggcgaaattacgccgcaacgtgctgaccttttattcgacggcggaacaagcg
gtccagctgtttatgcgccacgatgtcgcactggtgttcggcaattacggcagccagcaa
ctgaaagccttgcgcgacgccggcgccgatgtcggctatcagattccgcaagaaggcgcg
ctggcttggctggattgctgggcgattacccgcaacgcacgcaacccggcattggctgaa
caatggattgattacacgctggaacccaccgtcagcgaacgcctcagtgcccgtcacggc
ttggcaaacaccatctccgcccaccccgataccgaatccgggcaaaaactgatttggctg
gaacccgtcgccaatccggacctgcaaaaacagctgtgggatcgcgttatttccggcgaa
ccgcccgaggcgttttga
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