Methylomonas sp. EFPC3: PL263_18940
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Entry
PL263_18940 CDS
T10335
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
meec Methylomonas sp. EFPC3
Pathway
meec02024
Quorum sensing
meec03060
Protein export
meec03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
meec00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
PL263_18940 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
PL263_18940 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PL263_18940 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
meec02044
]
PL263_18940 (ffh)
Enzymes [BR:
meec01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
PL263_18940 (ffh)
Secretion system [BR:
meec02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
PL263_18940 (ffh)
Eukaryotic Sec-SRP protein
PL263_18940 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
CbiA
Zeta_toxin
AAA_16
MeaB
AAA_33
cobW
AAA_30
ParA
YqeC
APS_kinase
6PF2K
ATP_bind_1
AAA_14
PBP_dimer
nSTAND3
SLFN-g3_helicase
AAA_31
ResIII
TsaE
NACHT
MMR_HSR1
NB-ARC
ATPase_2
Thymidylate_kin
AAA_24
DUF1319
AAA_18
NTPase_1
KTI12
DUF6290
Motif
Other DBs
NCBI-ProteinID:
WFP50157
LinkDB
All DBs
Position
4164103..4165458
Genome browser
AA seq
451 aa
AA seq
DB search
MFDNLSDRLSGTLKKIKGQGRLTESNIQETMREVRMALLEADVALPVVTDFIEQVTQRAL
GQEVQTSLTPGQALIKVVQSELINVMGAANEELNLRTNPPAIVLMAGLQGAGKTTTVAKL
GRHLKEKKKKKVGVVSVDVYRPAAIKQLQTLADDIGLKFFESDASENPVDIVNRALDAAR
RQFVDVLIVDTAGRLHVDDEMMAEIKALHAAIKPIETLFVVDSMTGQDAANTAKAFHDAL
PLTGVILTKADGDARGGAALSIRQITGKPIKFIGVGEKTDALEPFYPDRLASRILGMGDV
LSLIEDIEQKVDKKKAEQLAKKLQKGKSFDLDDLKEQLLQMQNMGGLGAMMDKLPGMNNV
PKDIREKVNDKDLAHQIAVINSMTKQERRFPDLIKGSRKQRIADGCGLDLQAVNRVLKQH
QMMEKMMKKFSKGNITNMMRGLKSNMRGLRM
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgttcgataatttatccgatcgcctgagtggcacacttaaaaaaataaaaggccaaggc
cgtctgaccgagagcaatattcaggagaccatgcgcgaggtgcggatggctttgctggag
gccgatgtcgctttgccggtggtgaccgactttatcgagcaagttactcagcgcgcgctc
ggccaggaagtgcaaaccagtttgacgccgggtcaggctctgatcaaggtggtgcaatcg
gagctgataaatgtgatgggtgcggccaacgaagagttgaatctgcgtaccaatccgccg
gccatcgtgttgatggcgggcttgcagggtgccggtaaaaccacgacggtcgccaagctg
ggccggcatctgaaagagaagaaaaagaaaaaagtcggtgtggtcagtgtcgacgtctac
cggcccgcagcaatcaaacaattacaaaccctggctgacgacatcggtctgaagtttttc
gagagcgatgccagcgagaatccggtcgatatcgtcaatcgggcgcttgatgcggctaga
cgccaattcgtcgacgtactaatcgtcgataccgccggccggctgcatgtcgacgacgag
atgatggccgagatcaaggccttgcatgccgcgatcaagccgatcgaaaccttgtttgtc
gttgacagtatgaccggccaggatgccgccaataccgccaaagccttccacgacgcgctg
ccgttgaccggtgtgatcctgaccaaagccgatggcgacgcccgcggcggtgcggcattg
tccattcgtcaaatcaccggtaagccgatcaaattcatcggtgtcggcgaaaaaaccgat
gcgttggagccgttttatccggaccggctggcgtctcgtatcttgggtatgggcgacgtg
ttgtcgctgatcgaagatatcgaacaaaaggtcgacaagaaaaaagccgagcaattagcc
aagaagctgcaaaaaggtaaaagcttcgatttggatgatttgaaggaacagttgttgcag
atgcaaaacatgggcggtctgggggcgatgatggataagttgcctggtatgaacaatgtg
ccgaaagatattagggaaaaggtcaacgacaaggatttggcgcatcagattgccgtgatc
aattcgatgaccaagcaggagcggcggtttcccgatttgatcaagggtagtcgcaagcaa
cgtattgccgacggttgcggccttgatttacaagcggtaaatcgggtgttgaaacaacat
cagatgatggaaaagatgatgaagaagttcagcaaaggcaatatcaccaacatgatgcgc
ggcttgaagagtaatatgcgcggcctgagaatgtga
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