Methylococcus sp. EFPC2: JWZ97_01765
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Entry
JWZ97_01765 CDS
T10116
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
meef Methylococcus sp. EFPC2
Pathway
meef03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
meef00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JWZ97_01765 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
meef03019
]
JWZ97_01765 (pnp)
03016 Transfer RNA biogenesis [BR:
meef03016
]
JWZ97_01765 (pnp)
Enzymes [BR:
meef01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
JWZ97_01765 (pnp)
Messenger RNA biogenesis [BR:
meef03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
JWZ97_01765 (pnp)
Transfer RNA biogenesis [BR:
meef03016
]
Prokaryotic type
tRNA degradation factors
JWZ97_01765 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
OB_RRP5_4th
KH_2
S1_RRP5
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
QSA97597
UniProt:
A0A974VSX2
LinkDB
All DBs
Position
396063..398156
Genome browser
AA seq
697 aa
AA seq
DB search
MNPIRKTFHYGDHLVSFETGEIARQADAAVLVDMGGTVVLVTAVGLKEITREGDFFPLTV
NYQEKTYAAGRIPGGFFKREGRPSEKETLTARLIDRPVRPLFPEGFTNEVQVVATVVSLN
PEIDPDIPAMLGASAALTLSGMPFKGPIGAARVGYCDGQYLLNPGKSELATSELDLVVAG
TEKAVLMVESEAKRLPEDVMLGAVLFGHEQLQAGIKAIHELAQEFGVQPWDWTPAGENQV
LKSAVAEIAGARIAQAYLIAEKQVRQQTLKEIRASAVAALSADAAYAEKDIKATLEQLEY
EAVRSNILDEGKRIDGRDLKTVRPISIRTGVLPRTHGSALFTRGETQALVVATLGTGRDA
QLIDAIDGEYKDTFMLHYNFPPYCVGEVGMIGSPKRREIGHGRLAKRGVQAILPTQEEFP
YVVRVVSEITESNGSSSMASVCGSSLALMDAGVPTKAPVAGIAMGLIKEGDKFAVLSDIM
GDEDHLGDMDFKVAGTRDGVTALQMDIKIDGITPEIMKVALQQAQEGRLHILDKMDEALS
TPRQDMSDYAPRIVSFTIDPSKIREVIGKGGATIRAITEETGATIDITDDGVIKVASVDK
QAGVEARRRIELITAEVEVGRVYEGKVARLMDFGAFVTILPGKDGLVHISQISDQHVEKV
SDQLAEGDVVRVKVLEIDRQGRVRLSMKAVDAESAEG
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
gtgaatccgattcggaaaacatttcactacggcgatcatctcgtctctttcgaaaccggc
gaaatcgcccgtcaggccgatgccgccgttctggtagacatgggcggcaccgtcgtgctg
gtgaccgcggtcggtctcaaggaaattacccgggaaggcgattttttccccttgacggtc
aattatcaggaaaagacctatgccgcagggcgtatccccggcgggttcttcaagcgcgag
gggcgccccagcgagaaggagaccctgacggcccgcttgatcgaccgcccggttcgcccc
ctgttcccggaaggattcaccaacgaagtccaggtcgtggctaccgtggtctcgctcaat
cctgagatcgatccggacatcccggccatgctgggcgcttccgccgcgctgacgctttcg
ggcatgcctttcaaaggccctatcggcgccgcgcgggtgggttactgcgacggtcagtat
ctgctcaatcccggcaagagcgaactggcgacttcggaattggatctggtcgtcgccggc
accgagaaggccgtgttgatggtcgaatcggaagccaagcggctgccggaagacgtcatg
ctgggcgccgtgctgttcggtcatgagcagttgcaggccggtatcaaggcgatccacgaa
ttggctcaggagttcggcgtgcagccttgggactggacgcctgccggggagaatcaggta
ctcaagtcggcggttgcggaaatcgccggcgcgcgcatcgctcaggcttatctcatcgcc
gagaagcaggtgcgtcagcagaccctcaaggaaatccgcgcctccgccgtggcggccctg
agcgccgacgccgcctatgccgaaaaagacatcaaggcgaccctggagcagttggagtac
gaggccgtgcgcagcaacatcctcgacgagggcaagcgcatcgacggccgcgacttgaag
accgtgcgccccatcagcatacgcaccggcgtattgccccgcacccacggttcggcgctg
ttcacccgcggcgaaacccaggccctggtggtcgccaccctgggcaccggtcgcgacgcg
cagttgatcgatgcgatcgacggcgaatacaaggataccttcatgctgcactacaacttc
cccccgtactgcgtgggcgaggtcggcatgataggttcgcccaagcgacgcgagatcggc
cacggccgtctggccaagcgcggcgtgcaggctatcctgcctacccaggaagagttcccc
tatgtcgtccgcgtggtgtccgagatcaccgaatccaacggttccagttccatggcgtcg
gtgtgcggctccagcctggccctgatggatgccggcgtgccgaccaaggcgccggtggcg
ggcatcgcgatggggctcatcaaggaaggcgacaagtttgccgtgttgtccgacatcatg
ggcgacgaggaccacctgggcgacatggacttcaaggtcgccggaacccgcgacggcgtc
accgccctgcagatggacatcaagatcgacggcatcacgccggaaatcatgaaggtggcc
ctgcagcaggcgcaggaagggcgcttgcacatcctggacaagatggatgaggctttgtcg
actccgcgccaggatatgtcggactacgcaccgcgcatcgtgagtttcactatcgatccc
agcaagatccgcgaggtcatcggcaagggcggcgcgaccatacgcgccatcaccgaggaa
accggcgccaccatcgacatcaccgacgatggtgtgatcaaggtcgcttccgtcgacaag
caggctggtgtcgaggcccgtcgccgcatcgagttgatcaccgcggaggtcgaggtcggc
cgggtttacgaaggcaaggtcgcccgcctcatggacttcggcgcgttcgtcaccatcctg
cccggcaaggacggtctggtgcatatttcgcagatctccgatcaacacgtggagaaagtc
agcgaccagttggccgaaggcgacgtggttcgggtgaaggtattggagatcgaccgccag
ggccgcgtgcgtctgagcatgaaggccgtggacgcggagagcgccgaaggctga
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