Methylococcus sp. EFPC2: JWZ97_03540
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Entry
JWZ97_03540 CDS
T10116
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
meef Methylococcus sp. EFPC2
Pathway
meef00260
Glycine, serine and threonine metabolism
meef00630
Glyoxylate and dicarboxylate metabolism
meef00670
One carbon pool by folate
meef00785
Lipoic acid metabolism
meef01100
Metabolic pathways
meef01110
Biosynthesis of secondary metabolites
meef01200
Carbon metabolism
Module
meef_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
meef00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
JWZ97_03540 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
JWZ97_03540 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
JWZ97_03540 (gcvP)
00670 One carbon pool by folate
JWZ97_03540 (gcvP)
Enzymes [BR:
meef01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
JWZ97_03540 (gcvP)
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Gene cluster
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Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
QSA97914
UniProt:
A0A974VVC0
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Position
complement(823974..826850)
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AA seq
958 aa
AA seq
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MLNLPLAVLERRDEFMHRHIGPDEDEVASMLAALGLDSLDQLMNEAVPAGIRLAAPLPLG
PPVPEQEALARLRAMAAKNRVQRSLIGLGYYGTYLPKVILRNVLENPGWYTAYTPYQAEI
AQGRLEALSNWQQMVIDLSGLELANASLLDEATAAAEAMSMARRVSASPSRAFFVDAGVF
PQTQDVLKTRAKYFGFDLIFGAPEEAGKHAVFGALLQYPDRHGEVRDLTGIIAGLKSRDA
ITAVATDLMALVLLKSPGAMGADIALGSAQRFGLPLGFGGPHAAFFAVRDEYKRAVPGRI
IGVSIDARGKPALRMALQTREQHIRREKATSNICTSQVLLANLAGLYAVWHGPEGLRSIA
LRIHRLAALFAAGMQAAGYSLLTRYYFDTLDIATGDRTASLHAAAGDLGYNLRRVSENAL
GVSFDETSSREDLAALFQLFGVAADPEALDIPASGLPADSLRSDPILRHPVFNRHRTEHK
MLRYLKRLQNRDLALDHSMIPLGSCTMKLTATSEMLALGWPEFADLHPYAPREQALGYLE
MMNGLAGHLRAITGFPAISLQPNSGALGEYAGLVLIRRYHEARGETHRDVCLIPRSAHGT
NPASAAMCGLQVVTVDCDERGNIDISDLEAKAGQYRDRLAALMITYPSTHGVFEAAVKEI
CAAVHRRGGQVYMDGANLNAQLGLTSPAALGADVCHINLHKTFCIPHGGGGPGMGPIALA
SHLAPYMPDHAIQPTGASDRPNAGQGAVAATPYGSPSILTISWMYITMMGGAGLARATRV
AILNANYLATRLAPLYPVLYTGERGRVAHECIFDIRPIKAASGIGEVDIAKRLMDYGFHA
PTVSFPVPGTLMVEPTESESKDELDRFVAALSRIREEIDQVERGVWPADDNPLKRAPHTQ
ADVIDAEWNRPYNREEAVFPLAYVRENKFWPSVNRIDEVYGDRHLCFGCLPASEASSD
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaccttccgcttgcggtactcgaacggcgcgacgaattcatgcaccgccacatc
ggccccgacgaagacgaggttgcgtccatgctcgccgccttggggctggacagcctggac
cagttgatgaatgaagccgtgcccgccgggatacgactggccgcacccctgccgcttggc
ccgcctgtccccgaacaggaagccctggccaggctgcgcgccatggcggcgaagaaccgg
gtgcaacgctcgctgataggcctgggctactacggcacttatctgcccaaggtgatcctc
cgcaacgtgctggaaaatcccggctggtacaccgcctacacgccttatcaggcggagatc
gcccagggccggctcgaagcgctgagcaactggcagcagatggtgatcgacctcagcgga
ctggaactcgccaatgcatccctgctcgacgaggccaccgcggcggccgaggccatgagc
atggcccgccgggtttcggccagcccctcccgcgcgtttttcgtcgacgcgggagttttt
ccacagactcaggacgtactaaaaacgcgcgcgaaatatttcggcttcgacctgattttc
ggcgcgcccgaagaagccggtaagcacgcggttttcggcgccttgctgcaatacccggac
cggcacggcgaggtacgcgatctgaccggcatcatcgccgggctcaaatcccgagacgcc
atcaccgcggtcgccaccgacttgatggcactcgtgctgctgaaatcgcccggagccatg
ggtgcggacatcgcgctcggctccgcccagcgcttcggtttgcctttgggtttcggcggt
ccacacgccgcatttttcgccgtccgtgacgaatacaagcgtgccgtaccgggccgcatc
atcggcgtgtcgatcgacgcgcgcggcaaacccgccctgcgcatggccttgcagacgcgc
gagcagcacatccgccgggaaaaggccacgtccaacatctgcacttcccaggtactgctg
gccaatctggctggcttgtacgccgtgtggcacggccccgagggtttgcgatccatcgcc
ctccgcatccaccgcctcgccgccctgttcgcggcaggaatgcaggccgccggctacagc
ttgctgacccggtactatttcgacaccctggatatcgccaccggcgatcggaccgcgagc
ctgcatgccgccgcgggcgacttgggctacaacctgcgccgtgtttcggaaaacgccctg
ggcgtgtctttcgacgagacgagctcccgtgaagatctcgcggcgctcttccaattgttt
ggcgtcgccgccgatccggaagcgctggacatcccggcaagcgggctgccggccgacagt
ctgcgcagcgatcccatcctgcgtcacccggtgttcaatcgccatcgaaccgaacacaag
atgctgcgttaccttaaacggctgcaaaaccgcgacctggcactcgatcactcaatgatc
ccgctgggttcctgcaccatgaagctgacggcgaccagcgaaatgcttgcgctgggctgg
cccgaattcgccgacctgcacccctacgcgccgcgcgagcaggcgctcggttatttggag
atgatgaacgggctggctggccatctccgcgccatcacgggctttcccgcaatcagcctg
cagccgaattccggagccttgggcgaatatgccgggctggtcctcatacgccgctaccat
gaagcgcgcggcgaaacgcaccgcgacgtctgcctgattccccgctcggcccacggcacc
aacccggcgagcgcagcgatgtgcggactgcaggtggtgacggtcgactgcgacgagcgc
ggcaacatagacatctccgacctcgaagccaaggccgggcaataccgggatcgcctggcc
gcattgatgattacctacccgtcgacccacggcgtgttcgaggccgcggtgaaagaaatc
tgcgccgcggtgcatcgccgcggcggccaggtctacatggacggggccaatctcaacgcc
cagcttggcctcacctcgccggccgcgctcggcgccgacgtctgccacatcaacctgcac
aagacgttttgcataccccacggcggtggcggacccggcatggggccgatcgcgctggcg
agccatctcgccccttacatgccagaccacgccatccagccgaccggagcaagcgaccgc
ccgaatgccggccagggagccgtggccgccacgccctacggttcgcccagcatcctgacc
atatcctggatgtacatcaccatgatgggcggcgcggggctagcccgcgcgacccgcgtg
gccatcctcaacgccaactacctcgccacccggctggctccgctttatccggtgctctac
accggcgaacggggacgcgtggcccacgaatgcatcttcgatatccgccccatcaaggcc
gcgagcggcatcggcgaggttgacatcgccaagcgcctgatggactacggctttcacgcg
ccgaccgtgtccttcccggtgcccggcaccctgatggtcgagccgaccgaatcggaatcc
aaagacgaactggaccgcttcgtcgccgccctgagccgcatccgggaagaaatcgaccag
gtggagcgaggcgtttggcccgccgacgacaatccgctcaaacgcgccccgcatacccag
gccgacgtgatcgatgccgaatggaatcgcccctataaccgcgaggaagcggttttcccc
ctagcctacgtccgggaaaacaaattctggcccagcgtgaaccgtatcgacgaggtttat
ggcgaccgtcatctatgtttcggctgtctgccggcgagcgaggctagctccgactga
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