Methylococcus sp. EFPC2: JWZ97_05240
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Entry
JWZ97_05240 CDS
T10116
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
meef Methylococcus sp. EFPC2
Pathway
meef00521
Streptomycin biosynthesis
meef00523
Polyketide sugar unit biosynthesis
meef00525
Acarbose and validamycin biosynthesis
meef00541
Biosynthesis of various nucleotide sugars
meef01100
Metabolic pathways
meef01110
Biosynthesis of secondary metabolites
meef01250
Biosynthesis of nucleotide sugars
Module
meef_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
meef00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
JWZ97_05240 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
JWZ97_05240 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
JWZ97_05240 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
JWZ97_05240 (rfbB)
00525 Acarbose and validamycin biosynthesis
JWZ97_05240 (rfbB)
Enzymes [BR:
meef01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
JWZ97_05240 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
CBD_PlyG
Motif
Other DBs
NCBI-ProteinID:
QSA98223
UniProt:
A0A974ZPT5
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All DBs
Position
1238277..1239350
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AA seq
357 aa
AA seq
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MTSKTWLVTGGAGFIGGNFVLRQIARGDAQIVNLDALTYAGNLDTLSRIENHPDHHFVLG
SIGDRSLLDYLLDRYQPDAIVNFAAESHVDRSIDSPEAFVQTNVLGTFHLLEASRHYWRA
LPQERAEKFRFLHVSTDEVYGSLGPTGKFTETTPYQPNSPYSASKAGSDHLVRAYFHTYG
LPTLTTNCSNNYGPYQFPEKLIPLMIQNALAGKPLPVYGQGANIRDWLYVEDHCRAIERV
LEGGTPGEVYNVGGNNEKTNLDVVHTLCDLLDELLPESPHKPHRQLISFVTDRPGHDLRY
AIDAGKIRRELGWEPEETFETGLRKTVTWYLDNRGWAQRVMDGSYRGERLGLEGDAI
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgacttcgaaaacctggctggttaccggcggtgccggtttcatcggcggcaacttcgtg
ttgcggcaaatcgcgcgcggcgacgcacaaatcgtcaacctggacgcgctcacttacgcc
ggcaatctggataccttgagccggatagaaaatcaccctgaccaccatttcgtgctcggt
tcgatcggcgaccggtcgctgctggattatctgctggaccgttatcagccggatgccatc
gtcaatttcgcggcggaaagccatgtcgaccgctcgatcgactcgcccgaagccttcgta
cagaccaacgtgctcggcaccttccatctgctcgaagccagccggcactactggcgagcc
ttgccgcaggaacgggccgaaaagttccgctttctgcacgtctccaccgacgaggtctac
ggcagcctgggccccaccggcaagttcacggaaaccacgccctatcagcccaattctccc
tactcggcgtccaaggccggctccgaccatctggtgcgcgcttatttccatacctacggc
ctgccgaccctgaccaccaactgctccaacaattacgggccttaccagttcccggaaaaa
ctcattcccttgatgatacagaacgcgctggccggcaagccgctgccggtctatggccag
ggcgccaacatccgcgactggctttacgtggaagatcattgccgggccatcgaacgcgtg
ctggagggggggacgccgggcgaggtctataacgtcggcggcaacaatgagaagaccaat
ctcgacgtggtgcacaccctctgcgatctactcgacgagttgttgccggaatcgccgcac
aagccgcatcgtcaactcatcagtttcgtcactgatcggcccggccacgacctgcgttat
gcgatcgatgccggcaagatccggcgcgaactgggctgggagcccgaggaaaccttcgaa
accggattgcgcaagacggtgacctggtacctggacaaccgcgggtgggcgcagcgggtg
atggacggcagttatcgtggcgagcgactgggactggaaggtgatgccatatga
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