Methylococcus sp. EFPC2: JWZ97_05370
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Entry
JWZ97_05370 CDS
T10116
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
meef Methylococcus sp. EFPC2
Pathway
meef03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
meef00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JWZ97_05370 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
meef03019
]
JWZ97_05370 (pcnB)
Enzymes [BR:
meef01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
JWZ97_05370 (pcnB)
Messenger RNA biogenesis [BR:
meef03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
JWZ97_05370 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
DUF6932
Motif
Other DBs
NCBI-ProteinID:
QSA99034
UniProt:
A0A974ZQI3
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All DBs
Position
1270752..1272140
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AA seq
462 aa
AA seq
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MSILDFFKKLISAARPSERGEVLPPVRSADSSARIYPRSAHNISRAQISDNALKVLYRLR
KAGFQAYLVGGCVRDLLLGREPKDFDVVTDAHPEQVRGVFRNCRLIGRRFRLAHVHFGQE
IIEVATFRALNHEEGEGERVLERDGRILRDNVYGSIEEDAWRRDFTVNALYYDINDFSVV
DYVGGMQDHQASVLRLIGDPDRRYREDPVRMLRAVRFAVKLGFTIHPSCAEPIPKLAYLL
NSIPPARLYEEVVKLLMSGYAAQTFEQLRHYRLFGALFPETEACLAREPEGFPLTFLAKA
LERTDDRIQEDKSVAPFFLFAALLWEPVRTQAQERIRSGDNDVFAYQEVAAEVISRQVRY
IAIPRTIGQPMREIWALQPRFERIKGVRPYRLLGHPRFRAAYDFLVLRAETGEADPDLAD
WWTRFQRADDAEQKAMTREGGGRRRSGRARRRRKGGASAGSA
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
ctgtccatcctcgattttttcaagaagttaattagtgccgcccggcccagcgaacgcggt
gaagtcttgccgccggtcaggtctgcggattcgtcggcgcgcatctacccccgttcggcc
cacaatatatcgcgcgctcagatcagcgataacgccttgaaggtgctttatcgcttgcgc
aaggcgggatttcaggcctatctggtcggcggttgcgtgcgcgatctgctgttggggcgc
gaacccaaggatttcgacgtggtgaccgacgctcatcccgagcaggtgaggggcgtgttc
cgcaactgtcgcttgatcggtcgacgctttcgcctggcccacgtgcatttcggtcaggaa
atcatcgaggtggcgaccttccgcgcgctcaatcacgaggagggcgaaggcgaacgggtg
ctggagcgggacggccggatactgcgggacaatgtctacggttccatagaagaagacgcc
tggcggcgcgacttcaccgtcaatgccctctattacgatatcaacgatttttcggtggtc
gactatgtcggcggcatgcaggaccaccaggccagcgtgctgcgcctgatcggcgatccg
gaccggcgctaccgggaggatccggtgcgcatgctgcgcgcggtccgtttcgccgtgaag
ctgggcttcacgatacacccgagttgcgcggagcctatccccaagctggcttatctgctc
aattccatcccgccggccaggctttatgaagaagtcgtcaagctgttgatgtcgggctat
gccgcgcagaccttcgagcagttgcgccattaccgcttattcggcgcgctgttcccggag
accgaagcctgtctggctcgcgaacccgaaggctttcccctgactttcctggccaaggcc
ctggagcggaccgacgaccgcatacaggaagacaagtcggtggcaccgttttttctgttc
gccgccctgttgtgggagccggtgaggacgcaggcccaggagcgtatccggtcgggcgac
aacgatgtgttcgcttatcaggaagtggccgccgaagtgatttctcgccaagtgcgctat
atcgccattccgcgcaccattggtcagcccatgcgcgagatttgggccttgcagccgcgc
ttcgaacgcatcaagggcgtccgtccttatcgtttgctcggtcacccgcgttttcgggcg
gcctacgatttcctggttctgcgggcggaaaccggcgaggctgatccggatctggccgat
tggtggacgcggttccagcgggcggacgatgccgagcagaaagccatgacccgtgagggt
ggcgggcgcaggcgttccggccgggcgcgccggcgccggaaaggtggcgcatccgccggc
agcgcttaa
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