Methylococcus sp. EFPC2: JWZ97_07935
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Entry
JWZ97_07935 CDS
T10116
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
meef Methylococcus sp. EFPC2
Pathway
meef03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
meef00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
JWZ97_07935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meef03400
]
JWZ97_07935
Enzymes [BR:
meef01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
JWZ97_07935
DNA repair and recombination proteins [BR:
meef03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
JWZ97_07935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
DUF6471
DUF6478
Motif
Other DBs
NCBI-ProteinID:
QSA98703
LinkDB
All DBs
Position
1903889..1905229
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AA seq
446 aa
AA seq
DB search
MTTELQAPRTIYTVSELNGRARLVLSTQLGTVWVEGEISNLSQPSSGHLYFTLKDRDAQV
RCALFRGSVRGLACRPQNGIQVLVRAQVTLYEPRGDYQLVVDYLEEAGDGALRRAYEALK
LKLAGEGLFDPARKTPLPALPRCVGIVTSPTGAAVRDVLHVLARRFPALPVLIFPTKVQG
REAAAEIAGAIGLAERCGLCDVLLLARGGGSLEDLWAYNEEIVARAIAACSIPIVSGVGH
ETDTTIADLAADLRAPTPSAAAEAVSPDRVEWLARCARLESQLRHPMRVRLEGYARTLLH
LESRLRLSHPRRALDRNAQKLDELELRLQRAHAHCLTRHAARFSRVATRLLAHRPDRTLT
LLAARRDDWERRLNNAIRSQLQHRGMRLAQYSEKLHTVSPLATLARGYSITLRRLDGKAL
LDASEVEKGELIETRFAASSLISRVE
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccgaactgcaggccccccgtacgatctacaccgtgtccgagttgaacggccgg
gcccggctggtcttgagcacccaactgggtacggtctgggtggaaggggagatttccaat
ctatcgcaaccttcgtcgggccacctctatttcaccctcaaggaccgcgacgcccaggtt
cgctgcgccttgtttcggggaagcgtgcggggactggcttgtcgtccgcaaaacggcatt
caggtgttggtccgtgcgcaggtcaccctgtacgaaccccgaggcgactaccagttggtg
gtcgattatctggaggaagccggcgacggtgccctgcggcgggcttatgaagcgctcaag
ttgaagctcgcgggcgaaggcctgttcgatccggcacggaaaacgcccttgcccgccctg
ccccgctgcgtcggcatcgtaacctcgcccaccggcgccgcggtacgcgacgtgcttcac
gtgctcgcccggcgctttccggctctaccggtgctgatttttcccaccaaggtgcagggc
cgcgaagccgcggcggagattgcgggcgccattggacttgccgagcgctgcggcctttgc
gacgtgctgctcttggcccgcggcggcggttccctggaggacctgtgggcatacaacgag
gaaatcgtggcgcgggcgatcgccgcctgttccatccccatcgtcagcggggtgggacac
gaaaccgatactaccatcgccgatctggccgccgaccttcgtgcccccacgccttccgcc
gccgcagaggcggtcagcccggatcgtgtggaatggctggcgcgctgtgctcggctggag
tcccagttgcgccaccccatgcgggtacgcctggaaggatacgcccggaccctgctccat
ctggaatccaggctgcgcctgtcccatccgcgccgggctttggaccgcaatgcgcagaaa
ctggacgaactggaactgcgtctgcaacgggctcatgcgcactgcctgacccggcacgcg
gcgcgtttctcccgcgtggcgacgcgcttgctcgcccaccgcccggatcggaccctgacc
ctgctagccgcccgtcgggacgactgggaacgccgcctgaacaacgccatccgtagccag
ctgcagcaccggggcatgaggctggcccaatacagcgagaaactgcacaccgtcagcccg
ctggctacgctcgcgcgcggctattccatcacgctgaggcgactcgacgggaaagcgctg
ctcgatgcgagcgaagttgaaaaaggcgaactgatagaaacccgattcgcggcaagcagc
ctcatcagccgggtggaatga
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