Methylococcus sp. EFPC2: JWZ97_08965
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Entry
JWZ97_08965 CDS
T10116
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
meef Methylococcus sp. EFPC2
Pathway
meef02020
Two-component system
meef02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
meef00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JWZ97_08965
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
JWZ97_08965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
meef03021
]
JWZ97_08965
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
meef02035
]
JWZ97_08965
Transcription machinery [BR:
meef03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JWZ97_08965
Bacterial motility proteins [BR:
meef02035
]
Flagellar system
Flagellar assembly proteins
Stator
JWZ97_08965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_38
TY-Chap3
UPF0122
Motif
Other DBs
NCBI-ProteinID:
QSA98883
LinkDB
All DBs
Position
2126697..2127470
Genome browser
AA seq
257 aa
AA seq
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MSGIAMYAAVQAPDLDSLVRDHAPLVKRIAYHLLSRLPASVQLDDLVQAGMIGLLESAQH
YDASQGAAFETYAGIRIRGAMLDELRRYDWTPRSVHRKAREVADAIRVIEAKAGRDARDA
EVAEYLGMPLSEYHQALQDSVNCRVFSIEELLEDGDAVLEECADTRSTPVDRLTRAGFSA
ALADAISSLPERERMVISLYYDDELNLREIGVVLGVSESRVCQIQSQAMLRLRARLHDWL
DENTGVKHRGRRRSDRV
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggatcgcgatgtacgcagcggtgcaagccccggacctggactccctggttcgg
gaccatgcgcccttggtcaagcgcatcgcctaccacctgctcagccgcctcccggccagc
gtgcaactggacgacctcgtccaggccggcatgataggcctgctggaatcggcccaacat
tacgacgccagccagggcgccgctttcgagacctatgccggcatccgcatccgcggcgcc
atgctggacgaactgcggcgctacgattggacgccccgctcggtgcatcgcaaggcgcgc
gaagtggcggatgcgatccgcgtcatcgaagccaaggccgggcgcgacgctcgcgatgcc
gaggtggcggaatacctgggcatgcccttgtcggaatatcatcaagccctgcaagactcg
gtgaactgcagggtcttcagtatcgaggaattgctggaagacggcgacgcggtgctggaa
gaatgcgccgacacccgttccacgcccgtcgaccggctgacccgcgccggcttttcggcg
gcgctcgccgacgccatatccagtctgccggaacgcgagcgcatggtcatctccctgtat
tatgacgacgaattgaacctgcgcgagatcggcgtggtgctgggcgtcagcgaatcccgt
gtctgccagatccagagccaggcgatgttgcgcctgcgcgcccgactgcatgactggctg
gacgaaaacacgggcgtcaagcaccgtggccgaagacgcagcgaccgggtgtag
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