Methylococcus sp. EFPC2: JWZ97_10515
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Entry
JWZ97_10515 CDS
T10116
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
meef Methylococcus sp. EFPC2
Pathway
meef03410
Base excision repair
meef03430
Mismatch repair
meef03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
meef00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JWZ97_10515 (recJ)
03430 Mismatch repair
JWZ97_10515 (recJ)
03440 Homologous recombination
JWZ97_10515 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meef03400
]
JWZ97_10515 (recJ)
DNA repair and recombination proteins [BR:
meef03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
JWZ97_10515 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
JWZ97_10515 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
JWZ97_10515 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
QSA95684
UniProt:
A0A974ZMU9
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All DBs
Position
2486915..2488669
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AA seq
584 aa
AA seq
DB search
MLHHPVPKKILRRPLAPEIAPFSQLPSILQRVYRARDLTKPEELDRTLARLPSPRLLSGM
DDMVEQLACALRDKLHILVVADFDADGATSCAVALLGLQALGATQVSYLVPNRFEFGYGL
TPEIVDVAVARQPDILLTVDNGISSLEGVRTAKSQGLRVLITDHHLPGAELPEADAIVNP
NMPGDSFPSKSLAGVGVMFYVLMALRARLRDDGWFALSGISEPNLGQLLDLVALGTVADV
VNLDHVNRILVHQGLRRIRSGGARPGINALLEVAGRKPEAISAADLGFAAAPRLNAAGRL
EDMGLGIECLLSGYPDKARELAVRLDTLNKERREIEDQMKRDAFALLDNQQLACSPEALS
GICLFDPSWHQGVIGILAARLKDRLNRPVIAFAPAGEGSIKGSARSIPGVHIRDVLSDIA
ARHPALLSRFGGHAMAAGLSLRKTDYEDFAAVFDEEVGRHLQGLDLAHALHSDGELGNEE
LRLEAAELLQNAGPWGQGFPEPLFDGEFDVVQARVIGEKHLKLVLQTPDRQRSIDGIAFF
VEHPENWLGCRRLKAAYRLDVNEFRDQRSVQLRIEYMESCGADA
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgctccaccaccccgtaccgaaaaagatacttcgccgaccgctcgcccccgaaatcgcc
ccgttttcccagctaccgtcgattttgcagcgcgtctaccgggcacgggacctgaccaag
cccgaagagctcgatcgcacactcgccagactgccctcgccacggctgctgtccggtatg
gacgacatggtcgaacagttggcgtgtgccttacgagacaagctgcatatcctcgtcgtc
gccgatttcgacgccgatggcgccactagctgcgcggtcgccctgttgggcctgcaggca
ctgggagcgacacaggtttcctacctggtgcccaaccggttcgagttcggctacggcctg
acgcctgaaatcgtcgacgtcgccgttgcgcgacaacccgacattctcctgaccgtggac
aacggaatctccagcctggaaggcgtgcgtaccgcgaaaagccaggggctgcgcgtgctg
atcaccgatcatcacctgcccggcgccgaattgccggaagccgatgccatcgtcaatccc
aatatgccgggcgactcatttcccagcaaaagcctggcaggcgtaggcgtgatgttctat
gtgctgatggccctgcgggcccgcctacgagatgatggctggtttgcgctgtcgggcata
agcgaacccaatctcggacaattgctcgatctggtcgccttgggcacggtggccgacgtc
gtgaacctggatcatgtcaaccgtatcctggtgcatcaaggattacgacggatacgctcg
ggcggcgcacgccccggcatcaacgccctactggaagtcgccgggcgcaaaccggaggcg
atcagcgccgccgacctgggtttcgccgccgcgccccgactcaacgccgccggccgcctg
gaagacatgggcctgggcatcgaatgcctgctgtctggatatcccgacaaggcacgcgaa
ctcgccgtccgactcgacacactgaacaaggaacgccgcgaaatcgaggaccagatgaaa
cgggatgcttttgcgctgctcgacaatcagcaactcgcgtgcagccccgaagcactgtcg
ggtatctgcttgttcgacccgtcctggcatcagggcgtcatcggcatactcgccgcccgc
ctgaaggatcgcctcaaccgtcccgtcatcgccttcgctccggccggagaaggcagcatc
aagggttcggcgcgctcgataccgggcgtgcacatccgcgacgtgctgagcgacatcgcc
gcgcgccacccggcattgctcagccgtttcggcggccacgccatggcggcgggactcagc
ttaagaaaaacggactacgaagatttcgccgcggtcttcgacgaagaagtcggccgccac
ctgcaaggcctggacctcgcccatgccctacacagcgacggcgaactcggaaacgaggaa
ttacgcctggaagccgccgagctgctgcaaaacgccggcccctggggccaaggctttccc
gagcctctcttcgacggtgagttcgacgtggttcaggcccgcgtgatcggggaaaaacac
ctcaagctggtgttgcaaaccccggatcggcaacggtcgatagacggcatcgccttcttc
gtcgaacacccggaaaactggctgggctgccggcgcctcaaggccgcctatcggctggac
gtcaacgaattccgcgaccaacgcagcgtgcagctgcgaatcgagtacatggaaagctgc
ggggcggacgcctag
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