KEGG   Methylococcus sp. EFPC2: JWZ97_11670
Entry
JWZ97_11670       CDS       T10116                                 
Symbol
sbcB
Name
(GenBank) exodeoxyribonuclease I
  KO
K01141  exodeoxyribonuclease I [EC:3.1.11.1]
Organism
meef  Methylococcus sp. EFPC2
Pathway
meef03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:meef00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    JWZ97_11670 (sbcB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:meef03400]
    JWZ97_11670 (sbcB)
Enzymes [BR:meef01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.1  exodeoxyribonuclease I
     JWZ97_11670 (sbcB)
DNA repair and recombination proteins [BR:meef03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     JWZ97_11670 (sbcB)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     JWZ97_11670 (sbcB)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      JWZ97_11670 (sbcB)
SSDB
Motif
Pfam: Exonuc_X-T_C RNase_T
Other DBs
NCBI-ProteinID: QSA95896
UniProt: A0A974VPN5
LinkDB
Position
complement(2755521..2756963)
AA seq 480 aa
MSRTTLYWHDYETSGIDPRRDRPVQFAGLRTDLDLHPIGEPLTLYCRPSLDTLPTPEASL
VTGITPQQAWEKGVCEADFVAAIHGELARPGTCALGYNTLRFDDEVTRNTLYRNFYDPYE
REWRSGNSRWDLIDAVRAAAALRPEGIEWPRDEQGRPSFRLEVLTAANGIAHAGAHDALV
DVRATVELARLLRQRQPRLYDFLWSNRGKREAAALIKLGEFAPVLHVSEKFPAERHCLAV
VVALARHPDNGNGVIVYDLSADPAPLLELDVEQIRARLFTPVRDMPEGVERIPLKTVHLN
RCPVLAPMNVLRPADIERLQLDLERCRRHLETLRRASGLDGKLAEVFSAAPPEKPDDGDP
DLMIYRGGFFGDADRYRMSEIRALGPEDLARRYFDFDDARLPEMLFRYRARNWPDTLSEE
ERARWETLRRTRLTEAGHGASITLTEYENRIEALGREHADDSRKLAVLEALRAWGREIIS
NT seq 1443 nt   +upstreamnt  +downstreamnt
atgtccagaaccacactttactggcacgactacgagacctcgggcatcgatccgcggcgc
gaccgtcccgtgcaattcgccgggctcaggaccgacctggatctgcatcccatcggcgag
ccgctgacgctttattgccgtccatccctggatacgttgccgacacccgaagcgagtctg
gtcaccggcatcacgccgcaacaggcgtgggaaaaaggcgtttgcgaggcggatttcgtc
gccgcgattcatggcgaattggcacggcccggtacctgcgccttgggttacaacaccttg
cgcttcgacgacgaggtgacgcgcaacacgctgtaccgcaatttctacgacccctatgaa
cgcgaatggcgtagcggcaattcgcgctgggatctgatcgacgcggtgcgcgcggccgcc
gccttgaggccggagggaatcgagtggccaagggacgaacagggaagacccagttttcgt
ttggaggtcttgaccgcggccaacggcatcgcccacgccggcgcgcacgacgccctggtc
gacgtgcgcgcgaccgtcgaactggcccgcctgcttcgtcagcgtcagcccaggctgtac
gatttcctctggtccaaccggggcaagcgcgaagcggcggccctgatcaaactgggcgag
tttgcccccgtcctgcatgtttcggaaaaatttccggccgagcgccattgcctggcggtg
gtggtcgcgctggcccgtcatccggacaacggcaacggggtcatcgtctacgacctgagc
gccgatcccgcgcctttgctggaactggatgtcgagcaaatccgcgcccgattgtttacg
cccgtccgcgacatgcccgagggcgtggaacggatccccttgaagaccgtgcatctcaac
cgctgcccggtgctcgcgccgatgaatgtgctgaggccggccgacatcgaacgcctgcaa
ctcgatctcgagcggtgtcgcaggcatctggaaacgttgcgccgcgcatccggcctggac
ggcaagctggcggaggtcttttccgctgctccgccggaaaagccggacgacggcgatccc
gatttgatgatctaccggggcggatttttcggcgatgcggaccgctaccgcatgtccgag
atacgcgctttggggccggaggatctcgcccggcgctatttcgatttcgacgacgcccgc
ctgccggaaatgctgttccgctaccgcgcccgcaactggcccgacacgctgagcgaggag
gaaagggcgcgttgggagaccttgcgccggacccggctgacggaagccggtcatggcgcc
tccatcaccctgacggagtatgagaaccgcatcgaggcactgggtcgggagcatgcggac
gactcgcgcaagctggccgtgctcgaggcgctgcgcgcctggggtcgggaaattatcagt
taa

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