Methylococcus sp. EFPC2: JWZ97_13520
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Entry
JWZ97_13520 CDS
T10116
Symbol
msbA
Name
(GenBank) lipid A export permease/ATP-binding protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
meef Methylococcus sp. EFPC2
Pathway
meef02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
meef00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JWZ97_13520 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
meef02000
]
JWZ97_13520 (msbA)
Enzymes [BR:
meef01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
JWZ97_13520 (msbA)
Transporters [BR:
meef02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
JWZ97_13520 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
Zeta_toxin
ABC_ATPase
AAA
RsgA_GTPase
nSTAND1
AAA_21
AAA_29
DEAD
NACHT
DUF3584
AAA_5
HUTI_composite_bact
AAA_24
AAA_25
Motif
Other DBs
NCBI-ProteinID:
QSA96240
UniProt:
A0A974VSI2
LinkDB
All DBs
Position
complement(3156145..3157917)
Genome browser
AA seq
590 aa
AA seq
DB search
MPRSQSSPTEIDGFAIYRRLLQYSRPYWKVFSVSVVAMIVYSMLGPAFAKLLQPLIDGSF
IDQDPEILRAAPYILIALSLVRGVTGYAGEYCSGWVGRRIVADMRRKLFDQLLNLPSGFF
DKASSGELLSKLLYNTEQVANAMTVGLVNMLKDGLSMIGLTALMMYENIQLSLIFLVVAP
LLGFSIRKISKRFRRISMRIQESMGSVGHVTQEVIDAQRIVKVFNGKSYETEKFGKENER
NQKRQMKLIATDAMSGAVIQFIYMCGFAAILFVISIDSVRAGITPGSLISFVAAMAMMQS
PVKRFTNSLGNIQRGIAAGDSIFRMLDLEREIDTGSLELDTVQGRIEYRDIVLAYGERAE
KALDGVSLEVPAGRTIALVGQSGSGKTSLIRLLPRLYEPTTGRIYIDGRDIREFSLDNLR
SHIAYVGQEVTLFNDTVASNIAYGSRGAVTPEQIREAARAAYALSFIEELPQGFDTQVGQ
HGVVLSGGQRQRIAIARALLKNAPILILDEATSALDAESERYVQQALEALMRNRTTLVIA
HRLSTIHNADRIFVMREGRIVEQGSHAELLAANGYYTELNRMQFHTAAAA
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgccccgttcccagtcttcccccaccgaaatcgacggcttcgccatctacaggcgcctt
ttgcaatacagccgcccctattggaaggtgttttcggtttcggtcgtcgcgatgatcgtc
tattccatgctggggccggcgttcgccaagttgctccagccgctgatagacggcagtttc
atcgaccaggacccggaaatcctgcgcgcggcgccttacatccttatcgcgctttcgctg
gtgcgcggagttaccggatatgccggcgaatattgctccggctgggtcgggcgccgcatc
gtggccgacatgcggcgtaagctgttcgaccaattgctcaatctgcccagcggcttcttc
gacaaggcctcctcgggcgaactgctgtccaagctgctctacaacaccgaacaggtcgcc
aatgcgatgaccgtaggcctggtcaacatgctcaaggacggcctcagcatgataggcctg
accgccttgatgatgtacgagaacatccagctttccctgatcttcctggtcgtggcgcct
ctgctcggcttcagcatccgcaagatctccaagcgtttccgccgcatcagcatgcgcatc
caggaatccatgggcagcgtggggcacgtgacccaggaggtgatcgacgcccagcgcatc
gtcaaggtattcaacggcaagtcttatgaaacggaaaaattcggcaaggaaaacgagcgc
aaccagaagcgccagatgaagctgatcgcgaccgacgccatgagcggcgcggtcatccag
ttcatttacatgtgcggcttcgcggcgatcttgttcgtgatctccatcgattcggtgcgc
gccggcatcacgcccggcagcctgatctcattcgtcgccgcgatggccatgatgcagagt
ccggtcaaacgcttcaccaattcgctgggcaacatacagcgcggcatcgcggccggcgac
agcatcttccgcatgctggatctggagcgcgagatcgacaccggctcgctggaactggac
accgtccaaggccgcatcgagtaccgcgacatcgtcctcgcctacggcgaacgggcggag
aaggcgctggacggtgtcagcctggaggtgccggccgggcggaccatcgccctggtgggg
cagtccggtagcggcaagacctcgctgatccgcctgttgcccaggctgtacgagcccacc
acgggccgcatatacatcgatggtcgcgacatccgcgaattcagtctggacaacctgcgc
agccatatcgcctatgtcggccaggaagtcaccctgttcaacgatacggtggccagcaac
atcgcctacggttcccgcggggccgtcactccggagcagatccgcgaagccgccagggcg
gcctatgccttgtcgttcatcgaggaactgccgcagggcttcgatacccaggtcggccag
cacggcgtggtgctgtccggcggccagcgccagcgcatcgccatcgcccgcgccctgctg
aagaacgcacccatcctgatcctggacgaggcgacctcggccttggacgccgagtccgag
cgctacgtgcagcaggccctggaagcgctgatgcgaaaccgcaccaccctggttatcgca
caccgcctgtcgaccatacacaacgccgaccgcatcttcgtcatgcgcgagggccgcatc
gtcgaacaaggcagccacgcggaattgctggccgccaacggctattacaccgagctcaac
cgcatgcagttccacacggccgcggcggcctga
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