Methylococcus sp. EFPC2: JWZ97_14305
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Entry
JWZ97_14305 CDS
T10116
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
meef Methylococcus sp. EFPC2
Pathway
meef03030
DNA replication
meef03410
Base excision repair
meef03420
Nucleotide excision repair
meef03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
meef00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JWZ97_14305 (polA)
03410 Base excision repair
JWZ97_14305 (polA)
03420 Nucleotide excision repair
JWZ97_14305 (polA)
03440 Homologous recombination
JWZ97_14305 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
meef03032
]
JWZ97_14305 (polA)
03400 DNA repair and recombination proteins [BR:
meef03400
]
JWZ97_14305 (polA)
Enzymes [BR:
meef01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JWZ97_14305 (polA)
DNA replication proteins [BR:
meef03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
JWZ97_14305 (polA)
DNA repair and recombination proteins [BR:
meef03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
JWZ97_14305 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JWZ97_14305 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
QSA96380
LinkDB
All DBs
Position
complement(3306534..3309257)
Genome browser
AA seq
907 aa
AA seq
DB search
MSTSPDKTLVLVDGSSFLYRAFHALPPLTNSRGEPVGAVVGVANMLRRLLSEYPQAHVAV
VFDAPGKTFRDEAYEHYKAHRPPMPDDLRAQIAPLHELVRTMGFPLLMESGVEADDVIGT
LTHRALEQGFSVVISTGDKDMAQLVNERVVLENTMNNTRMDIARVNEKFGVPPERIVDYL
ALVGDTADNIPGVPKCGPKTAAKWLADFGSLDELMARADEVGGKIGESLRASLASIPLSR
ELATIKCDVELDVAPDQLVVATPDPARLKELLQRLEFNSWLKQLEGTGGAPAPAAAVASD
PPKATERRYETVATEADLRRWLARLENAELFAFDTETTALDYSRAEIVGLSFAIEPGEAA
YVPLKHDYPGVPDQLNREAVLEKLRPLLEDPERAKLGQHLKYDANVLANHGIELRGIRHD
TMLESYVLDSTATRHDMDSLAAHYLKEQTIHYEDVAGKGAKQIPFAQVDIEAATAYAAED
ADITLRLHQHLWPLLEAEPSLKALYEEVEIPLVPVLSRMERTGVLVDVFKLAEQSDLLAA
RMRELEKAAHDEAGQPFNLGSPKQIQTILYDKMNLPVVKKTPKGQPSTDESVLQELAEIY
DLPRLILEHRAISKLRSTYCDRLPEQLNPRTGRVHTSYHQAVAATGRLSSSDPNLQNIPV
RSDEGRKIRQAFIAPPGYKLLAADYSQIELRIMAHLSGDQSLLQAFAQGEDIHRATAAEV
FETAPENVTADQRRAAKAINFGLIYGMSAFGLAKQLGVGRERAQLYIDLYFRRYPGVQAY
MDHSRETARQRGYVETLFGRRLYVPDINAKNGQRRQYAERTAINAPMQGTAADIIKRAMI
SVDRWIESEHPPVRMIMQVHDELVFEVREDYLQEGAAAIRQRMEAAADLAVPLIVEVGTG
DNWGEAH
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgtctacctccccggataaaaccctggttctcgtcgacggctcgtcctttctctatcgg
gccttccacgccttgccgcctttgaccaattcgcgcggcgagccggtgggggcggtcgtc
ggcgtggccaacatgctgcgacgcctgctgtcggaatatccgcaagcgcacgtagccgtg
gtgttcgatgcgccgggcaagaccttccgcgacgaggcctacgagcactacaaggcacac
cgcccgcccatgccggacgatctgcgcgcgcagatcgcgccgctgcacgaactggtcagg
accatgggcttcccgttgttgatggaaagcggcgtggaagcggacgacgtgatcggtacc
ctgacccatcgcgcgctggagcaaggcttcagcgtagtgatctccaccggcgacaaggac
atggcgcagttggtgaacgagcgcgtggtgctggaaaacactatgaacaacacgcgcatg
gacattgccagggtgaacgagaaattcggcgtgccgccggagcgcatcgtcgactatctg
gccctggtcggcgacacggcggacaacatccccggtgtgcccaaatgcggccccaagacc
gcggcgaaatggcttgccgacttcggcagcctggacgagctgatggcgcgggcggacgag
gtcggcggcaagataggcgagagtctgcgggcgagcctggctagcatacccttgtcgcgc
gaactggcgaccatcaaatgcgacgtggagctggatgtggcgcccgaccagctggtcgtg
gcgactcctgacccggcgcgcctgaaggaactgctgcaacgcctggagttcaattcctgg
ctcaagcagctcgaaggcacgggcggcgcgccagcgcccgcggccgcggtggcctccgac
ccgcccaaggccaccgaacgacgctacgagaccgtggctacggaagcggatctgcgccgc
tggctggcgcgtctggagaatgccgagctcttcgccttcgataccgaaaccacggcgctc
gattattcccgcgcggagatcgtcggactctcattcgccattgagccgggcgaggcggcc
tatgtccccctgaagcacgactaccccggcgtgccggaccaattgaaccgcgaggcggtg
ctggaaaagctcaggccgctactggaagaccccgagcgcgccaagctgggccagcatctg
aaatacgacgccaacgtgctggccaaccacggcatcgaactgcgcggtatacgccacgac
accatgctggagtcctatgtgctggacagcaccgcgacgcgacatgacatggattcgctg
gcggctcattatctcaaggagcagaccattcattacgaagacgtggccggcaagggcgcc
aagcagataccgttcgcccaggtggacatcgaagcggccacggcctatgccgccgaggat
gccgacatcaccctgcgtctgcaccagcatctctggcctttgctggaagccgagcccagc
ttgaaggctttgtacgaggaggtcgaaatacccctggtgcccgtgctctcgcgcatggag
cgcaccggcgtactggtcgacgtgttcaagctggccgagcagagtgacttgttggccgcg
cgcatgcgcgagctcgagaaggccgcccacgacgaagccggccagcctttcaacctgggt
tcgcccaagcagatccagaccattttgtacgacaagatgaatctgccggtggtgaagaag
acgcccaagggccagccttcgacggatgagtcggtgttgcaggaactggcggaaatctac
gacctgccccgtttgatcctggagcaccgggccatctccaagctcaggtccacttattgc
gaccgcctgcccgagcagctcaatcccaggaccggccgggtgcatacctcttatcaccag
gcggtggcggccaccgggcgcttgtcttcatccgatcccaatctgcagaacatcccggtg
aggagcgacgagggccgcaagatccgccaggctttcatcgcgccgccgggctataagctg
ctggccgccgactactcgcagatcgaactgcgcatcatggctcatctgtccggcgaccag
agcctgcttcaggctttcgcccagggcgaagatatccatcgagcgactgccgcggaagtg
tttgagaccgcgccggaaaacgtcacggccgatcagcgccgtgccgccaaggccatcaac
ttcgggctgatctacggcatgtccgccttcggactcgccaagcaactgggtgtggggcga
gagcgggcgcaactctatatagatctgtatttccggcgttatccgggtgtccaggcctac
atggaccacagccgggaaacggcacgccagcgcggctacgtggaaaccctgttcggccgc
aggctctacgtgccggacatcaacgccaagaacggccagcgccggcaatatgccgagcgc
accgccatcaacgcgcccatgcaggggacggcggcggacatcatcaagcgggcgatgatt
tccgtcgaccgctggatagaatcggagcatccaccggtccggatgatcatgcaggtgcac
gatgaactggtgttcgaagtccgggaggactatctgcaggagggcgccgccgcgataaga
cagcggatggaggccgcggccgacctggcggtgcccctgatcgtcgaggtcggaacgggc
gataattggggcgaagcccactga
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