Methylococcus sp. EFPC2: JWZ97_15195
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Entry
JWZ97_15195 CDS
T10116
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
meef Methylococcus sp. EFPC2
Pathway
meef03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
meef00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JWZ97_15195 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meef03400
]
JWZ97_15195 (xth)
Enzymes [BR:
meef01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
JWZ97_15195 (xth)
DNA repair and recombination proteins [BR:
meef03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
JWZ97_15195 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
SNU71_N
Motif
Other DBs
NCBI-ProteinID:
QSA96549
LinkDB
All DBs
Position
complement(3556942..3557724)
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AA seq
260 aa
AA seq
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MLRVISANLNGIRSAVSKGFLPWLEKQHADFVCLQELKAQTADMTAEMLNPHGYYGYFHY
AEKKGYSGVGLYAKHQPERIVEGLGVAEIDAEGRYLELVYGNLSVISVYLPSGSSGEHRQ
TAKYAFMDYFYGHLADLANADREVLLCGDWNIAHQEIDLKNWKSNQKNSGFLPEERAWLT
RVFDELGWVDVYRRLHPETTGEAYTWWSNRGQAWAKNVGWRIDYQIATPALAAQALSTSI
YKDERFSDHAPLTVDYDWKV
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgtgtcatcagcgccaacctcaacggcatacgctccgccgtcagcaagggcttt
ctgccctggctggaaaaacagcacgccgatttcgtctgcctgcaggaactcaaggcccag
accgccgacatgacggcggagatgctcaatccgcacggctattacggctatttccactac
gccgagaagaagggttacagcggcgtaggactctacgccaaacaccagcccgagcgtatc
gtcgaaggcctgggcgtggccgagatcgacgccgaggggcgctatctcgaactggtctac
ggcaacttatccgtcatctccgtttacctgccctcgggttccagcggcgaacaccggcag
acggccaaatacgccttcatggactatttctacggtcacctggcggatctggcgaatgcc
gaccgtgaagtcctactctgcggcgactggaacatcgcccaccaggaaatcgatctgaag
aactggaaaagcaaccagaagaacagcggcttcctgcccgaagagcgcgcctggctcacc
cgggtgttcgacgaactgggctgggtggacgtctaccgccgcctgcatccggagaccacc
ggcgaggcctacacctggtggagcaaccgcggccaggcctgggccaagaacgtgggatgg
cgcatcgactaccagatcgccacccccgcgctcgccgcccaggccctctcgacgagcatc
tacaaggacgagcgcttcagcgaccacgcgccgctgacggtggattacgactggaaagtt
tga
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