KEGG   Methylococcus sp. EFPC2: JWZ97_15195
Entry
JWZ97_15195       CDS       T10116                                 
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
meef  Methylococcus sp. EFPC2
Pathway
meef03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:meef00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    JWZ97_15195 (xth)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:meef03400]
    JWZ97_15195 (xth)
Enzymes [BR:meef01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     JWZ97_15195 (xth)
DNA repair and recombination proteins [BR:meef03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     JWZ97_15195 (xth)
SSDB
Motif
Pfam: Exo_endo_phos Exo_endo_phos_2 SNU71_N
Other DBs
NCBI-ProteinID: QSA96549
LinkDB
Position
complement(3556942..3557724)
AA seq 260 aa
MLRVISANLNGIRSAVSKGFLPWLEKQHADFVCLQELKAQTADMTAEMLNPHGYYGYFHY
AEKKGYSGVGLYAKHQPERIVEGLGVAEIDAEGRYLELVYGNLSVISVYLPSGSSGEHRQ
TAKYAFMDYFYGHLADLANADREVLLCGDWNIAHQEIDLKNWKSNQKNSGFLPEERAWLT
RVFDELGWVDVYRRLHPETTGEAYTWWSNRGQAWAKNVGWRIDYQIATPALAAQALSTSI
YKDERFSDHAPLTVDYDWKV
NT seq 783 nt   +upstreamnt  +downstreamnt
atgcttcgtgtcatcagcgccaacctcaacggcatacgctccgccgtcagcaagggcttt
ctgccctggctggaaaaacagcacgccgatttcgtctgcctgcaggaactcaaggcccag
accgccgacatgacggcggagatgctcaatccgcacggctattacggctatttccactac
gccgagaagaagggttacagcggcgtaggactctacgccaaacaccagcccgagcgtatc
gtcgaaggcctgggcgtggccgagatcgacgccgaggggcgctatctcgaactggtctac
ggcaacttatccgtcatctccgtttacctgccctcgggttccagcggcgaacaccggcag
acggccaaatacgccttcatggactatttctacggtcacctggcggatctggcgaatgcc
gaccgtgaagtcctactctgcggcgactggaacatcgcccaccaggaaatcgatctgaag
aactggaaaagcaaccagaagaacagcggcttcctgcccgaagagcgcgcctggctcacc
cgggtgttcgacgaactgggctgggtggacgtctaccgccgcctgcatccggagaccacc
ggcgaggcctacacctggtggagcaaccgcggccaggcctgggccaagaacgtgggatgg
cgcatcgactaccagatcgccacccccgcgctcgccgcccaggccctctcgacgagcatc
tacaaggacgagcgcttcagcgaccacgcgccgctgacggtggattacgactggaaagtt
tga

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