Methylococcus sp. EFPC2: JWZ97_15300
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Entry
JWZ97_15300 CDS
T10116
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
meef Methylococcus sp. EFPC2
Brite
KEGG Orthology (KO) [BR:
meef00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
meef03009
]
JWZ97_15300 (rimO)
Enzymes [BR:
meef01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
JWZ97_15300 (rimO)
Ribosome biogenesis [BR:
meef03009
]
Prokaryotic type
ribosomal protein modification factors
JWZ97_15300 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
DUF3489
TRAM
YajR_YAM
DUF5666
Motif
Other DBs
NCBI-ProteinID:
QSA96569
UniProt:
A0A974ZNP6
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All DBs
Position
3582543..3583853
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AA seq
436 aa
AA seq
DB search
MATPRIGFISLGCPKALVDSERILTQLRSEGYDLVPTYRDADLVVVNTCGFIDAAVEESL
DAIGEALAENGKVIVTGCLGAREAEIRSRHPQVLKITGAHAYEEVVGAVHEHLPPRHDPF
VDLTPPQGIKLTPQHYAYLKISEGCNHRCTFCIIPSLRGDLVSRPIGEVMTEAERLVNAG
VKELLVVSQDTSAYGVDLKYGTSFWGGRPLKTRFYDLARALGELDVWVRLHYVYPYPHVD
EVIPLMTEGKVLPYLDIPFQHSSSRILKLMKRPASAENTLERIQAWRRECPELILRSTFI
VGFPGETEAEFEELLDFLDEAQLDRVGCFAYSPVQGAVANELPGAVPEEIKQERLARFME
RQQGISAERLQARVGWREHVLVDEVVEEGAVARSYADAPDIDGQVFIDGATDLEVGEFVE
VEIEEADEHDLWAHRV
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaccccgcatcggcttcatcagcctgggctgtccgaaggctttggtcgacagc
gaacgcatcctcacccaactccgttccgagggctacgacctggtgcccacttaccgcgac
gccgatctggtggtcgtcaacacctgcggcttcatcgacgcggcggtggaagaatcgctg
gatgcgatcggcgaggccctggccgagaacggcaaggtcatcgtcaccggctgcctgggc
gcaagggaagccgagatccgcagccgtcatccccaggtgctcaagatcacaggcgcccat
gcctatgaggaagtggtcggcgcggtgcacgagcatctgccgccgcgtcacgatcctttc
gtcgatctcacgccgccgcaaggcatcaagctcacgccccagcattacgcctatctgaag
atttccgagggctgcaaccaccgctgcaccttttgcatcattccctcgctgcggggcgac
ctggtcagccggccgatcggcgaagtgatgaccgaggccgaacggctggtgaacgccggg
gtgaaggaattgctggtcgtctcgcaggacaccagcgcctacggggtcgatctgaaatac
gggaccagcttctggggtggtcggccgctcaagacccgcttctatgatctcgcccgcgcg
ctgggcgaactggacgtgtgggtgcggctgcattacgtctacccctatccgcatgtcgac
gaggtcatcccgctgatgaccgagggcaaggtgctgccctacctggacattccctttcag
cattcgtcgagccgcatcctcaagctgatgaagcggccggccagtgccgagaacaccctg
gagcgtatccaggcctggcgccgcgagtgcccggaactgatcctgcgctccaccttcatc
gtcggcttccccggcgagaccgaagccgagttcgaggaattgctggatttcctcgacgag
gcccagctcgaccgcgtcggctgcttcgcctattcgccggtccagggcgccgtcgccaac
gaactgcccggcgccgtgccggaagagatcaaacaggaacggctggcccgcttcatggaa
cgccagcagggcatcagcgccgagcgcttgcaggcacgggtgggctggcgcgagcatgtg
ctggtcgacgaagtggtcgaggaaggcgcggtggcccgcagctatgccgatgcaccggac
atcgacggccaggtcttcatcgatggcgcgaccgatctggaagtcggcgagttcgtcgag
gtcgagatcgaggaagccgacgaacacgacctatgggcgcatcgggtctga
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