Methylococcus sp. EFPC2: JWZ97_18990
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Entry
JWZ97_18990 CDS
T10116
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
meef Methylococcus sp. EFPC2
Pathway
meef00300
Lysine biosynthesis
meef00470
D-Amino acid metabolism
meef01100
Metabolic pathways
meef01110
Biosynthesis of secondary metabolites
meef01120
Microbial metabolism in diverse environments
meef01230
Biosynthesis of amino acids
Module
meef_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
meef00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
JWZ97_18990 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
JWZ97_18990 (lysA)
Enzymes [BR:
meef01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
JWZ97_18990 (lysA)
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QSA97240
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Position
4393456..4394703
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AA seq
415 aa
AA seq
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MDYFNYRDGVLHAEDVPLSAIAERHGTPTYVYSRATLERHWHAFDRAYAAKPHLICYAVK
ANSNLGLLNVLARLGSGFDIVSLGELERVLAAGGDPAKVVFSGVGKREDELRRALEVGIR
CFNVEVAGELDRLNRIAGELGVKAPVSLRVNPDVDAQTHPYISTGLKENKFGIDIRAALD
EYRRAADLPHLEVVGVDCHIGSQLTGTGPFLDALERVLLLVEQLREQGITLHHLDLGGGL
GIRYREETPPEPAELATAVLERLADLPYEILVEPGRAIVGNAGILLTRVEYLKSTPAKQF
AIVDAAMNDLLRPSLYQAWQAILPVIEGGVGEAQTWDVVGPVCETGDFLGKERSLAIREG
DLLAVRSAGAYGFSMSSNYNSRPRAAEVLVDGGTVHLVREREALSRLFEGETLLP
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggactatttcaattatcgcgacggcgtattgcacgccgaagacgtgcccttgtccgcc
atcgccgagcgccacggcacgcccacctacgtctattcccgtgccaccctggagcgtcac
tggcatgccttcgaccgcgcttatgcggccaagccgcatctgatctgctacgcggtcaag
gccaattccaacttggggctgctgaatgtgctggccaggctgggctccggcttcgacatc
gtttccttgggcgagttggagcgtgtgctggcggccggcggcgatcccgccaaggtggtc
ttttccggcgtgggcaagcgcgaggacgaactgcgccgggccttggaagtgggcatacgc
tgcttcaacgtcgaggtcgcgggcgagctggataggctcaaccgcatcgccggcgaactg
ggcgtcaaggcgccggtttcgctgcgcgtgaatcccgacgtcgacgcgcagacccatccc
tatatctccaccggcctcaaggaaaacaagttcggcatcgacatccgtgccgcgttggac
gaataccgccgcgcggcggatctgccccatctggaggtggtcggcgtcgattgccacatc
ggctcgcagctcaccggtaccgggccattcctggatgcgctcgaacgcgtgttgctgctg
gtcgaacaactgcgcgagcagggcatcaccctgcaccacctcgatctgggcgggggcttg
gggatacgctaccgcgaggaaacgccgcccgagccggcggagctggcgaccgccgtcctc
gagcggctggccgacctgccttatgagatcctggtcgagccgggccgcgccatcgtcggc
aacgccggcatcctgctgacgcgggtggaatatctcaagtccacaccggccaagcagttc
gccatcgtcgacgcggccatgaacgatttgctgcggccttcgctctaccaggcctggcag
gccatattgccggtgatcgaaggcggcgtgggcgaggcgcaaacctgggacgtggtcggc
ccggtatgcgaaaccggcgacttcctgggcaaggagcggtctttggccatccgcgaaggt
gatttgctggcggtgcgctcggccggggcctacggcttcagcatgagctccaactacaat
tcgcgcccccgcgccgcggaggtgctggtcgacggcggtacggtgcacctggtgcgcgag
cgggaggcgttgagccgcttgttcgaaggcgagacactgctgccatga
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