Methylomonas sp. EFPC1: JWZ98_00280
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Entry
JWZ98_00280 CDS
T10319
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
meep Methylomonas sp. EFPC1
Pathway
meep03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
meep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
JWZ98_00280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meep03400
]
JWZ98_00280
Enzymes [BR:
meep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JWZ98_00280
DNA repair and recombination proteins [BR:
meep03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JWZ98_00280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
PriA-like_WH
AAA_30
Zot
AAA_22
Zn_ribbon_6
HypA
Mtr2
AAA_19
nSTAND3
TrwB_AAD_bind
SLFN-g3_helicase
PIF1
A2L_zn_ribbon
Motif
Other DBs
NCBI-ProteinID:
QSB01444
LinkDB
All DBs
Position
complement(67135..69342)
Genome browser
AA seq
735 aa
AA seq
DB search
MPNCDTSGNLILKVAVPVPLDRLFDYLPPLGVNVSELQAGVRVLVPFGKRQQVGILLAVA
ENSSVRMDKLKPAIAILDTQPLLADTDIQLLRWASRYYHHPIGEVLAAAFPVALRQGRPA
LLQHQPCFGLSPQGRLVSPEQLRRAPKQQALLALLQSTGSAMTAAALSAYKPALKALLDK
GLVTAQEFAPGGGLAVTKTALPANPEQQAAIDAVIANLGRFAVSLLEGVTGSGKTEVYMQ
IIAEVLAQGKQVLVLLPEISLTPQLEQRFLKRFAVNLVSTHSKLTDNQRLQAWLSMQQGH
AAIMLGTRSALFTPMPRPGLIILDEEHDSSFKQQEGFRFSARDVAIARAKGLGIPVLLGS
ATPSLESMANVAQHRYQLLHLPNRAGNATAPSFQLLDIRNKRMQAGLSEPLLAEIQATLA
KKQQALIFLNRRGYAPVQICHGCGWVSRCRRCDANLVIHAADRLLRCHHCGSEQALLKQC
PACKTGELQALGLGTERIEQTLETLFPDKTIVRLDRDTTQRKGSLEHYLEQIHDGGVDII
LGTQMLAKGHHFPGVTLVAILDIDSGLFSIDYHGSERLAQLIVQVAGRAGRADQPGKVVL
QTRHPQHPLLETLLSKGYRAFAQSALQERRQAGLPPFGHQALLRVQAGKAEEPQQFLQAV
CRKISELNPGKVQVLGPVTAPMARRAGLFRYQLLLQSPQRKELHHLLDNLLPAIYALKEA
KKVRWSLDVDPVDLY
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgcctaactgtgatacttccggcaatttaattttgaaagttgccgtgccagttccgctg
gaccgcttattcgattatttgccgccacttggcgttaatgtgtcggaattgcaagcaggt
gtcagagtgttggtgcctttcggtaagcgccagcaagtagggattttgctggctgtcgcg
gagaattccagcgtccggatggataaactcaaaccggccatcgccattttggatacccag
ccgctattggcggacaccgacattcagttattacgctgggccagccgctattatcaccac
ccgattggtgaagtgctggccgcggcgtttccggtggccttgcgccaaggccggccggct
ttactgcaacaccaaccctgtttcggcctcagcccgcagggtcggctggtttccccggaa
caattacgccgcgcacccaagcaacaagcactattggctttgttgcagtccaccgggagt
gcgatgacagctgccgcgcttagcgcctacaagccggcgttgaaagccttgctcgacaag
ggcttggtcacggcgcaagaattcgctccgggcggcggattagccgtcactaagaccgcg
ttaccggccaaccccgaacagcaggctgctatcgatgcggtcatcgccaatctgggccgc
tttgccgtatccttgttggagggcgtgaccggtagcggcaaaactgaagtgtatatgcag
atcatcgccgaggtgttggcgcagggcaaacaggtgctggttttactgccggagatcagc
ctgacgccgcaattggagcaacgttttctaaagcgttttgccgtgaacctggtgtccacc
cattccaaattaaccgataaccagcgtttgcaggcctggctgagtatgcagcaaggccat
gccgccatcatgctcggcacccggtccgcgttgtttacgccgatgccgcgccccggcctg
atcattctcgacgaagagcacgatagttcgttcaaacaacaggaaggctttcgcttttcc
gcgcgggacgtcgccattgccagggccaagggtttgggtatcccggtgttattgggatcg
gcgacgccgtcgctggagagcatggcgaacgttgcccagcaccgctaccaattactgcat
ttgcccaatcgggccggcaatgccacggcaccgagctttcagttattggacatacgcaat
aaaagaatgcaagccggcctgtccgaaccgctgctggcggaaatccaagccacgctggcc
aaaaaacaacaagcgctgatttttctcaaccgccgcggctacgcgccggtgcagatttgc
catggctgcggctgggtgtcgcgttgccggcgctgcgatgccaatttggtgattcacgcc
gccgaccgcttgctgcgctgccatcactgcggcagcgaacaagccttgctcaagcagtgt
ccggcctgtaaaaccggcgaattacaggcgctgggcttgggtaccgaacgtattgaacaa
accttggaaaccttatttccagacaagacaatcgtgcgcctggaccgagataccacgcag
cgcaagggttctttggaacactacctggagcaaattcacgatggtggtgtcgatattatt
ctcgggacgcaaatgctcgccaagggccaccattttccgggggtgacgctggtcgccatt
ctggatatagacagcggcctgttcagtatcgattaccacggcagcgagcgcctggcgcaa
ttgatcgtgcaggttgccggccgcgccggccgcgccgaccaacccggcaaggtggtattg
caaacccgccatccgcaacatcctttgctggagaccttgctaagcaaaggctatcgggct
ttcgcacaaagtgcgctccaggagcggcggcaggccggcttgccgccgttcggtcatcag
gccttgctgagggtgcaagctggcaaggccgaggaaccgcaacagtttttgcaagcggtt
tgccggaaaatcagcgagctaaatcccggtaaggttcaggtgctggggccggtgacggca
ccgatggccagacgcgcaggtttgttccgttaccagttgctgttgcagagtccgcagcgc
aaagaattacaccacttgctggacaatttgttgcctgccatttatgcgttgaaggaagcc
aaaaaggtgcgttggtcgctggatgtcgatccggtggatttgtactag
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