Methylomonas sp. EFPC1: JWZ98_01280
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Entry
JWZ98_01280 CDS
T10319
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
meep Methylomonas sp. EFPC1
Pathway
meep00300
Lysine biosynthesis
meep00470
D-Amino acid metabolism
meep01100
Metabolic pathways
meep01110
Biosynthesis of secondary metabolites
meep01120
Microbial metabolism in diverse environments
meep01230
Biosynthesis of amino acids
Module
meep_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
meep00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
JWZ98_01280 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
JWZ98_01280 (lysA)
Enzymes [BR:
meep01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
JWZ98_01280 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QSB01630
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Position
281824..283074
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AA seq
416 aa
AA seq
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MDFFNYRQHELFAESIPVDKIAENYGTPCYVYSRATLERHWQAFDQGFAGHPHLICYAVK
ANSNIAILNVLARLGSGFDIVSLGEMQRVLAAGGSPDKIVFSGVGKREDEILAALKIGIR
CFNVEVSGELDRINRLAGELGVIAPVSFRVNPDVDAKTHPYISTGLKENKFGIDIKQAIH
EYRRAAQMPNIQIVGIDCHIGSQLTETVPFLDALDRVLALVDELQEEGIELHHLDLGGGL
GICYRDEHPPQPSEYISALLQRLAGRSFEILLEPGRAIVGNAGILLTRVEYLKPTDNKNF
AIVDAAMNDLVRPALYGAWQAIIPANAESDQVELDWDIVGPVCETGDFLGKARSLKLKQG
DLLAVRSAGAYGFTMSSNYNSRPRAAEVMVDGDKTHLIRSRETLEQLWVGEQLLPE
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggatttttttaattatcggcaacatgagttgtttgccgaaagcattcctgttgacaaa
attgccgaaaactacggtactccctgctatgtctattcgcgcgcgaccttggagaggcat
tggcaagccttcgatcaaggctttgccgggcacccgcaccttatttgttatgccgtaaaa
gccaattcaaatattgcgattctcaacgtgctggcgcgacttgggtctgggttcgacatc
gtgtcgcttggcgaaatgcagcgcgtgctagctgcgggcggcagtcctgacaaaattgtg
ttttccggtgtcggtaaacgcgaggacgaaatcttagcggcgctgaaaataggtatacgc
tgttttaatgttgaagtcagtggcgaacttgatcggatcaaccgtttagccggtgagctg
ggtgttattgctccagtgtctttccgggtcaatccggatgttgatgctaagacgcatccc
tatatttccaccggcttgaaagaaaataaattcgggatcgatatcaagcaagccattcat
gaatatcggcgcgccgcgcagatgccgaatatccaaatagtcggtatcgattgccatatt
ggctctcaattaactgaaacagtgccgtttttggatgcattggatagggtgttggcgtta
gtcgatgagctgcaagaggaaggtattgaattgcaccatctcgatttaggaggcgggctg
ggtatttgttatcgcgatgagcacccaccgcaaccttctgaatatatttcagctctgctg
cagcgtttggcgggacggagctttgaaattctattggagccggggcgcgccatcgtcggc
aatgcgggaatattgttaaccagagtggagtaccttaagccaacagacaataaaaacttt
gccattgtcgatgcggcgatgaatgatctggttaggccggctttatacggggcgtggcag
gcaatcattccggcgaatgccgaaagcgatcaggtcgagttggattgggacatcgtgggg
ccggtttgcgagaccggtgactttctgggcaaggcgcggtcgttaaaattgaaacaaggc
gacttattggcggttcgttcagcgggagcctacgggtttacgatgagttcaaactataac
tcgaggccacgagcggcggaggtaatggtggatggcgataaaacgcatcttattcgatcc
cgagaaactctggagcagctatgggttggcgagcagcttttacctgagtag
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