Methylomonas sp. EFPC1: JWZ98_03480
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Entry
JWZ98_03480 CDS
T10319
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
meep Methylomonas sp. EFPC1
Pathway
meep00550
Peptidoglycan biosynthesis
meep01100
Metabolic pathways
meep01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
meep00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
JWZ98_03480 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JWZ98_03480 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
meep01011
]
JWZ98_03480 (mrdA)
Enzymes [BR:
meep01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
JWZ98_03480 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
meep01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
JWZ98_03480 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
QSB02035
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Position
734713..736557
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AA seq
614 aa
AA seq
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MDRKFAIKDPLAESRLFLSRIVAAFILILFLIAGLVTRLVYLQVVGHEHYATLSKDNRIK
ISPLPPTRGVIYDRKGRMLAENVPTYSLELIPEQIENLDDTLVRLQKLLDISEEKIDLFQ
KQRKRNKSFTSTPLLQNLSDEEVAKFAVVRPYFPGVDVYARLVRHYPYGDLASHVVGYVG
RINEKEMQTLPLAKYRGTNHIGKTGIEKTYEEHLLGTAGYEEIETNAQARAVNTVATVEP
VAGSNIYLTLDIDLQKIAYDALSEYNGAAVAIEIKTGGVLVFASRPGFDPNPFVSGISGK
EYKALQDSPDQPLYNRALRGQYPPGSTVKPFLGLAGLEYGVTDFNHRLFCPGYYKLPNVD
HKYRDWKKWGHGMVDMNEAITQSCDVYFYDLALALGIDKMHDFMDKFSFGRKTGIDLVGE
VDGLMPSKEWKKHYRSQAWFPGETLITGIGQGYTQATPLQLAHATATLANYGKVITPHLV
HSIISADYADMIGGKADALIPLKTQNVDNIIKGMTNVVHGARGTAGRLAKAITYQIAGKT
GTAQVFTIKQEEKYNEDAIDFKMRDHALFIAFAPVHDPQIAVAIIAEHGGHGGSVAAPIA
GEIIDAYLNQKKEP
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggatagaaaattcgccattaaagatccgctcgccgaaagtcgcttatttttaagccgc
atcgtcgcggcgtttatcttgatcctgtttttgatcgccggtttggttacccgtttggtg
tatttgcaggtggtcggtcacgagcactatgcaaccttgtccaaggacaaccgcatcaaa
atttcgcccttgccacccacccgtggcgtgatttacgaccgcaagggccggatgctagcg
gaaaatgtgccgacctacagcttggagttgattccagagcaaatcgaaaatctcgacgac
acgctagtcagattgcaaaagctgctggatatttccgaggaaaaaatcgatttgtttcaa
aagcagcgtaagcgcaacaaatccttcaccagtacgccgttgctgcagaatctcagcgac
gaggaagtcgctaaatttgccgtggtcaggccgtatttccccggtgtcgatgtctacgct
cgcttggtgcggcattatccttacggcgacttggcttctcatgtggtcggctatgtcggt
cggatcaacgaaaaggaaatgcaaactttgccgctggccaaatatcgcggcaccaaccac
atcggcaaaaccggcatcgaaaaaacctatgaagagcatttgctgggcaccgccggctac
gaggaaatagaaaccaatgcgcaggccagggccgtcaatactgtagcgacggtggagccg
gtggccggttccaatatctacctgacgctggacatcgatttgcaaaaaatcgcctacgat
gccttgtcggaatacaacggcgccgcggtggcgatagaaatcaaaaccggcggggtgctg
gtgttcgccagccggcccggtttcgatcccaatccgtttgtttccgggatttccggcaaa
gaatacaaagccttgcaggattcgccggatcagcctttatacaaccgggccttgcgcggc
cagtatccgccgggttccaccgtcaagccgtttctaggcttggccggtctggaatatggc
gtcaccgattttaaccaccgtttgttctgtccgggttattacaagctgccgaatgtcgat
cacaagtatcgcgactggaaaaagtgggggcacggtatggtggatatgaacgaggctatt
acccagtcttgcgacgtgtatttttacgacctggccttagcattgggtatcgataagatg
cacgactttatggacaaattcagtttcggtcgaaaaaccggtatcgatttggtcggcgag
gtcgatggattgatgccgtctaaggaatggaaaaaacattaccgtagccaggcctggttt
ccgggcgaaacgctcattaccggcatcggtcagggttacacgcaggccacgccgctgcag
ttggctcacgctactgctacgctggctaactacggcaaagtgatcacaccgcatttggtg
cacagtattatcagcgctgattacgcggacatgataggcggtaaagccgatgcactaatt
ccgctgaaaacccaaaatgtcgataacatcatcaaaggcatgaccaacgtggtgcacgga
gcgcggggtaccgccggccgtttggctaaggccatcacctatcaaattgccggcaagacc
ggcaccgcgcaagtgtttaccatcaagcaggaagagaaatacaacgaggacgccatcgat
tttaaaatgcgcgaccatgctttgttcatagcctttgcgccagtccacgacccgcaaatt
gcggtggcgatcattgccgagcacggcggccacggcggctcggtggcggcgccgattgcc
ggcgaaattatcgatgcctatctgaatcaaaaaaaggagccgtag
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