Methylomonas sp. EFPC1: JWZ98_04050
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Entry
JWZ98_04050 CDS
T10319
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
meep Methylomonas sp. EFPC1
Pathway
meep03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
meep00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
JWZ98_04050 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
meep03021
]
JWZ98_04050 (rpoA)
03400 DNA repair and recombination proteins [BR:
meep03400
]
JWZ98_04050 (rpoA)
Enzymes [BR:
meep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
JWZ98_04050 (rpoA)
Transcription machinery [BR:
meep03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
JWZ98_04050 (rpoA)
DNA repair and recombination proteins [BR:
meep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
JWZ98_04050 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
Stk19
Motif
Other DBs
NCBI-ProteinID:
QSB02140
LinkDB
All DBs
Position
847748..848758
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AA seq
336 aa
AA seq
DB search
MQSSIVGLLKPRLVEVINESANHSRIVIEPLERGFGHSLGNALRRVMLSSIPGCAVTEIS
IEGVLHEFTTIEGVQEDVIDIILNLKKLAVVVHSKDEVTLTLAKSGVGVVTARDIELPHN
VELVNPDLIIANINNQDCSLNIKIKVERGRGYVPASLRKEMNDDAPVGVLMVDAAFSPIV
KVAYHVESTRVEQRTNLDRLVIELETNGTVDPEQAIKLAASILHDQLSVFVDFEKVNEQI
HEEVAIEEESFDPVLLRPVDDLELTVRSANCLKAENIFYIGDLIQRTEVELLRTPNLGKK
SLTEIKDILAIKGLSLGMRLENWPPENLADQSQAGI
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgcagagttctattgttggcctacttaagcctagacttgtcgaggtgattaacgaatcg
gccaaccactcgagaatcgttatcgagcctctggagcgcggcttcgggcattctttaggc
aatgctttgaggcgggtcatgctgtcttcaattccaggttgcgcggttacagaaatttct
atcgaaggtgtgttgcatgaattcaccacgatagaaggtgttcaagaagatgtcatagac
ataatactgaaccttaagaaacttgctgtcgtcgttcattctaaggatgaagtgactctc
acgctggctaaatcgggtgttggtgtcgtaactgctcgggatattgaactaccccataat
gtggagttagtaaacccggatctgataatcgcaaacatcaacaatcaagactgctcactc
aacatcaagattaaggtcgagagaggtcggggttatgttcctgccagtctgaggaaagag
atgaatgacgacgccccggtcggtgtgttaatggttgatgcggcgtttagtcctatagta
aaggtcgcttatcatgtagaaagcactcgtgtcgaacaacgcactaatctggataggctc
gttatagaattggagacaaatggtacggttgatcctgagcaggcgatcaaattagccgct
tctattcttcatgaccagttatctgtgttcgtagattttgaaaaagttaacgaacagata
catgaggaggtagcaattgaggaagagtcgttcgatccagtcctgctacgtcctgtagat
gatttggagttgacggttcgttctgccaactgcctaaaggcggaaaacattttctatatc
ggcgatctgattcagcggaccgaagtggagttgttgaggacacctaatctgggtaagaag
tcgttaacggaaattaaagatattcttgcaattaaaggtctgtcattgggtatgcgcttg
gaaaactggccacctgaaaatctggctgatcaatcgcaagctggaatttga
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