Methylomonas sp. EFPC1: JWZ98_04250
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Entry
JWZ98_04250 CDS
T10319
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
meep Methylomonas sp. EFPC1
Pathway
meep02024
Quorum sensing
meep03060
Protein export
meep03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
meep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
JWZ98_04250 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
JWZ98_04250 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JWZ98_04250 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
meep02044
]
JWZ98_04250 (ffh)
Enzymes [BR:
meep01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
JWZ98_04250 (ffh)
Secretion system [BR:
meep02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
JWZ98_04250 (ffh)
Eukaryotic Sec-SRP protein
JWZ98_04250 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
CbiA
Zeta_toxin
MeaB
AAA_33
AAA_16
DnaB_C
YqeC
APS_kinase
AAA_31
AAA_14
AAA_30
DUF1319
cobW
6PF2K
AAA_24
TsaE
ATPase_2
KTI12
ABC_tran
SLFN-g3_helicase
Relaxase_C
ResIII
ATP_bind_1
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
QSB02179
LinkDB
All DBs
Position
893476..894831
Genome browser
AA seq
451 aa
AA seq
DB search
MFDNLSDRLSGTLKKIKGQGRLTESNIQDTMREVRMALLEADVALTVVTDFIDQVTQRAL
GQEVQTSLTPGQAMIKVVQSELVKVMGSANEELNLRTNPPAIVLMAGLQGAGKTTTVAKL
GRHLKEKKKKKVGVVSVDVYRPAAIKQLETLAADVGLKFFESDVSENPVDIVNRAIDAAK
RQFLDVVIVDTAGRLHVDDEMMAEIKALHAAIKPIETLFVVDSMTGQDAANTAKAFHDAL
PLTGVILTKADGDARGGAALSIRHITGKPIKFIGVGEKTDALEPFYPDRLASRILGMGDM
LSLIENIEQNVDKKKAEQLAKKLQKGKSFDLNDLKEQLEQMQNMGGLGAMMDKLPGMSGV
PKDIKDKVNDKDLAHQIAVINSMTKQERRFPDLIKGGRKQRIADGCGLDLQAVNRVLKQH
QMMEKMMKKFSKGNIANMMRGLKSNMRGMRM
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgtttgataatttatctgatcgcctcagtggcacactaaaaaaaattaaaggccaaggt
cgtctgaccgagagcaatatccaggacaccatgcgcgaagtaagaatggctttgctggaa
gccgatgttgctttgacggtggtgaccgattttatcgatcaagttactcagcgcgcgttg
ggtcaggaagtgcaaaccagtttgacgcctgggcaggcaatgatcaaagtggtgcagtcc
gagctggtcaaggtgatgggttctgcgaacgaagagctgaatctgcgtaccaatccgccg
gcaatcgtattgatggcaggtcttcagggcgcgggtaaaacgactacggtggcaaaatta
ggtcgccatctaaaagaaaagaaaaagaaaaaagtcggggtggttagtgttgacgtttat
cgtcctgccgcgattaagcaattggagacgttggccgccgatgttggattaaagtttttc
gaaagcgatgtcagcgaaaatcctgtcgatattgtcaacagggctatagatgcagcaaag
cgccaatttttagatgtggtaattgtcgacaccgccggacgtttgcatgtcgatgacgag
atgatggcagagatcaaagctttgcacgccgcaatcaagccgattgagaccttatttgtg
gttgatagcatgaccggtcaagatgctgcaaacactgccaaggcttttcatgatgccttg
ccattgaccggtgtcattctgaccaaggccgacggcgacgcgcgtggcggagcggcgctt
tccattcggcatataaccggcaagccgattaagtttatcggtgtcggcgaaaaaaccgat
gccttagagcctttctatcctgatcggttggcttcgcgtattctcggtatgggcgatatg
ttgtcgctgattgagaatatcgagcaaaatgtcgacaaaaaaaaggccgagcaattagcc
aaaaagctgcaaaaaggcaaaagcttcgatttgaacgacctcaaagagcagcttgaacaa
atgcagaatatgggcgggcttggcgctatgatggataagctgccgggtatgagtggcgtg
cctaaagacattaaggataaagtcaatgacaaggatctggcgcatcagattgccgtaatc
aactcaatgactaagcaagaacggcgttttcctgatctaattaaaggcggtcggaagcag
cgtatcgccgatggttgcggcttggacttgcaggctgtaaatcgtgtgttgaagcagcat
caaatgatggaaaagatgatgaaaaaattcagcaagggtaatattgccaacatgatgcgc
ggcttgaagagcaatatgcgcggcatgagaatgtga
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