Methylomonas sp. EFPC1: JWZ98_05290
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Entry
JWZ98_05290 CDS
T10319
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
meep Methylomonas sp. EFPC1
Pathway
meep00630
Glyoxylate and dicarboxylate metabolism
meep00680
Methane metabolism
meep01100
Metabolic pathways
meep01120
Microbial metabolism in diverse environments
meep01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
meep00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
JWZ98_05290 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
JWZ98_05290 (fdhF)
Enzymes [BR:
meep01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
JWZ98_05290 (fdhF)
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
Molybdop_Fe4S4
NADH-G_4Fe-4S_3
Fer4_7
Fer4
Fer4_21
Fer2
Fer4_10
Fer4_Nqo3
Fer4_9
Fer4_15
Fer4_6
Fer4_2
Fer4_8
Fer4_16
Fer4_4
Fer4_18
Motif
Other DBs
NCBI-ProteinID:
QSB02370
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All DBs
Position
complement(1111413..1114265)
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AA seq
950 aa
AA seq
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MSANNEIDYGTPASSSANQVTLEIDGHKVTVNTGSSVMRAAAEAGISIPKLCATDSLDPF
GSCRMCLVQVEGARGYPASCTTPVAEGMKVCTQNDKLASIRRGIAELYISDHPLDCLTCA
ANGDCELQDTVGQVGLREVRYGFDGENHLDSEKDTSNPYFSFDPAKCIVCSRCVRACEEV
QGTFALTIDGRGFDSKVSPGQNQPFMESECVSCGACVQACPTATLMEKSVIDNGVPEHST
ITTCAYCGVGCSFKAEMKGEQLVRMVPDKNGQANHGHSCVKGRFAFGYATHKDRITTPMV
REKISDPWREVSWEEAIGFAANKLKGIQAKYGKDSIGGITSSRCTNEETYLVQKLIRAGF
GNNNVDTCARVCHSPTGYGLKSTFGESSGTQTFDSVMQSDVIMVIGANPTDGHPVFGSMM
KRRLRQGAKLIVVDPRSIDLVSNSPHVKADYHLKLRPGTNVAVVTALAHVIVTEGLADEK
FALERCDVESFNKWKTFVALPQHSPEAVAELTGVPAESMRAAARLYATGGNGAIYYGLGV
TEHSQGSTTVIGIANLAMATGNIGRDGVGVNPLRGQNNVQGSCDMGSFPHEFVGYRHVSD
SQTRIQFETAWNVALSSEPGLRIPNMFAAAIDGSFKGLYVQGEDIAQSDPDITHVHHALR
ELECLVVQDIFLNETAKFAHVFLPGSSFLEKNGTFTNAERRISPVRKVMTPLGGKEDWEV
TQDLSNALGYPMNYSHPSEIMDEIAALTPQFAGVSYEKIDEMGSIQWPCNDETPDGTPIM
HADHFVRGKGRFMLTEYVATEERTSSKYPLILTTGRILSQYNVGAQTRRTENVAWHEEDR
LELHPHDAEVLGISDGDWCGVKSRSGETVLRAKVTDRMQPGVVYTTFHFPHSGANVITTD
NSDWATNCPEYKVTAVHVAKVAQPSAWQQEYQDFSDNQLSLLENRIAVNE
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccaataacgaaatagattacggaactcctgcgagttcgtctgcaaatcaagtc
actctggaaatcgacggtcataaggtcactgtcaataccggcagttccgtaatgcgcgcc
gccgccgaagcagggatcagcattcctaaattatgcgctaccgatagcctcgatccgttc
ggctcttgtcggatgtgcttggtacaagtcgaaggcgcgcgcggctatccagcatcttgt
accaccccggtcgccgaaggcatgaaggtctgtacccagaacgataaattggccagcatc
agacgcggcatcgccgaactgtatatctccgaccatcctttagactgtctgacctgtgcc
gccaacggcgactgcgaactgcaagacaccgtcggtcaagttggcttgcgtgaagtccgt
tacggcttcgatggcgaaaaccatctggattctgaaaaagacaccagcaatccttatttc
agtttcgacccggcgaaatgcatcgtctgttcgcgttgtgtgcgcgcttgcgaggaagtg
caaggcaccttcgcgttgaccatcgacggtcgcggcttcgactccaaagtctctccaggc
caaaaccagccattcatggaatccgaatgcgtatcctgcggcgcttgcgtacaagcctgc
cctaccgcgacgctgatggaaaaatcggtgatcgacaacggcgtccctgagcacagcacc
atcaccacctgcgcctattgcggggttggctgctcattcaaagccgaaatgaaaggcgaa
caactggtgcgcatggtgcctgacaaaaacggccaagccaatcatggtcactcttgtgta
aaaggtcgtttcgcgttcggttatgccacccacaaagaccgcatcaccactcccatggtc
cgggaaaaaatttccgatccttggcgcgaagtcagctgggaagaagccatcggttttgcc
gccaacaaattgaaaggtattcaagccaaatacggcaaagactcgataggcggcatcacc
tcgtcacgctgcaccaacgaagaaacctatctggtgcaaaaattaatccgcgccggcttc
ggtaacaacaatgtcgacacctgcgcccgcgtttgccactcaccgaccggctacggattg
aaaagcacatttggcgagtcatccggcacccaaacctttgactcggtgatgcagtccgat
gtgattatggtaatcggcgccaacccaaccgacggccacccggtattcggttcgatgatg
aaacgccgcttacgccaaggtgcgaaactaatcgtggtcgatccacgcagcattgatttg
gtgagcaatagcccgcatgtaaaagccgactatcatctgaaactgcgccccggcaccaac
gttgcggttgtcactgcattggctcacgtcatcgtcaccgaaggcctggcggacgaaaaa
tttgcgttggaacgttgcgatgtcgagtcgtttaacaaatggaaaaccttcgttgcgctg
cctcagcattcacctgaagccgttgccgaattgaccggcgtgcctgccgagagcatgcgc
gcggcagcccgcttgtacgcaacaggcggtaatggtgcgatctattacggcttgggcgtt
accgaacatagccaaggctcgacgaccgtcataggtatcgccaatttagcgatggctacc
ggcaatatcggccgcgacggcgtcggcgtcaatccattgcgcggacaaaataacgtgcaa
ggctcttgcgatatgggttcgttcccgcacgagttcgtcggctaccgccatgtttccgat
tcgcaaacccgcattcagttcgagacagcttggaacgtagcgctgtcatccgaacccggc
ttacgcatcccgaatatgtttgccgccgctatcgacggcagtttcaaaggcttgtacgta
caaggcgaagacatcgctcagtctgacccggacataacgcatgtccaccacgcgctacgc
gaactggaatgcttggtggtacaagacattttcctgaacgaaacggccaaattcgcccac
gtatttttaccgggctcctcgttcctggaaaagaacggcacgtttaccaacgccgaacgc
cggatttcaccagttcgcaaagtcatgaccccactgggcggtaaggaagactgggaagtg
acccaggacttgtccaacgcgctgggttatccgatgaattacagtcatccttcggaaatc
atggatgaaatagcggcgctgacgccacaatttgccggcgtcagttacgaaaaaatcgac
gaaatgggcagcatccaatggccttgcaacgacgaaaccccggacggtacaccgataatg
cacgccgatcacttcgtccgcggcaaaggtcgtttcatgctgaccgaatacgttgcaacc
gaagaacgcaccagcagcaagtatccgctgatactgacaaccggccgaatcttgtcgcaa
tacaacgtcggagcgcaaacccgccgcactgaaaacgttgcttggcatgaagaagaccgt
ctggaattgcacccgcacgatgccgaagtcttaggcatcagcgatggcgattggtgcggc
gtgaaaagtcgctccggcgaaacggtattgcgcgccaaggtcacggaccgcatgcagccg
ggcgtggtttataccactttccatttcccgcattccggcgccaacgttataaccacggat
aactcggactgggcaaccaactgtccggaatacaaggtgacagcggtgcatgtcgccaaa
gtggcgcaaccgtcggcatggcaacaggaataccaagacttttccgacaatcagttgtct
ttgctggaaaaccgcatcgcggtcaacgagtaa
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