Methylomonas sp. EFPC1: JWZ98_07050
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Entry
JWZ98_07050 CDS
T10319
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
meep Methylomonas sp. EFPC1
Pathway
meep03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
meep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JWZ98_07050 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
meep03400
]
JWZ98_07050 (xth)
Enzymes [BR:
meep01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
JWZ98_07050 (xth)
DNA repair and recombination proteins [BR:
meep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
JWZ98_07050 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
QSB02686
LinkDB
All DBs
Position
complement(1483347..1484123)
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AA seq
258 aa
AA seq
DB search
MLRIISANLNGIRSATRKGFYDWLDTQNPDFVCLQELKAQAGDMTAEMLAPNGLHGYFHY
AEKKGYSGVGIYSKQPADKVIEGLGHADIDSEGRYLEVQVGNLSVISLYLPSGSSSEERQ
TVKYSVMERFYPHLADLKASDREVVICGDWNIAHKEADLKNWRGNQKNSGFLPAERSWMT
QIYDELGWVDVYRRLHPDATDACYTWWSNRGQAWAKNVGWRIDYQVATPGIANRAQSTSI
FKEQRFSDHAPLIVDYAD
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgctccgcatcatctccgccaatctaaacggcattcgctcggcaaccagaaaaggtttt
tacgactggttagacacccaaaatccagacttcgtctgcctacaagaacttaaagcccag
gccggcgatatgacagccgagatgctggcgccgaacggtctgcacggttattttcattat
gccgaaaagaagggctacagcggcgtcggtatctatagcaaacaacctgcagacaaggta
attgaaggcctgggccatgcggacatcgatagcgaaggccgctatctggaagtgcaagtc
ggcaatctatcggtcatttccctgtatctgccgtccggctccagcagcgaggaacgacaa
accgtcaaatacagcgtgatggaacgcttctatccgcatcttgccgacctcaaagccagc
gaccgggaagtggtcatttgcggcgactggaatatcgcccataaagaagcggatttgaaa
aattggcgcggcaaccagaaaaactccgggtttttgccggcggaacggtcctggatgacc
caaatatatgatgagctgggctgggtagatgtttatcgcagactacatcccgacgctacc
gacgcctgctacacgtggtggagcaatcgtggccaggcttgggccaaaaatgtcggttgg
cgtatcgattatcaagtcgccacgccgggtatagccaatcgtgcacaatcaaccagcatt
tttaaagagcaacgcttcagcgaccatgcgccattgatcgttgattacgcagactag
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