Methylomonas sp. EFPC1: JWZ98_07300
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Entry
JWZ98_07300 CDS
T10319
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
meep Methylomonas sp. EFPC1
Pathway
meep00541
Biosynthesis of various nucleotide sugars
meep01100
Metabolic pathways
meep01250
Biosynthesis of nucleotide sugars
Module
meep_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
meep00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
JWZ98_07300 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
meep01005
]
JWZ98_07300 (rfaD)
Enzymes [BR:
meep01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
JWZ98_07300 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
meep01005
]
Core region
JWZ98_07300 (rfaD)
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
ThiF
Motif
Other DBs
NCBI-ProteinID:
QSB02735
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Position
1542199..1543140
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AA seq
313 aa
AA seq
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MIIVTGGAGFIGSNLLLGLNARGYDDILVVDHLTNGIKYRNLVECKIADYLDRSTFLERL
QQGAFQAESIEAIFHQGACSSTTEWDGRYMMDNNYEYSKTLFHYCQSHKIPFIYASSAAT
YGADLTFKEELAYEGPLNVYGYSKFQFDQYLRRQQKLTAQVVGLRYFNVYGPREAHKGSM
ASVAFHLNNQIKDSDELRLFEGCDGYGNGEQRRDFVYVGDVVAINLWFLDNPQASGIYNC
GTGRSQTFNDVANAVIKFHQRGHIKYIPFPEHLKGCYQSFTEANLDKLRAAGCKHSFQTV
EQGVQLYMEWLNG
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
gtgatcatcgtaaccggtggcgccggctttattggcagcaatctgttattgggcctgaat
gcccgcggttatgatgatattttggtagtcgaccatttgactaacggtatcaaataccgg
aatttggtcgagtgcaagatagcggattatctggacagaagcacctttttggaacgactg
caacaaggtgctttccaagcagaatcgatagaagccatatttcatcagggcgcctgttcc
agcacgacagagtgggacggccgctacatgatggacaacaattatgaatacagcaaaacg
ctgtttcattattgccaaagccataaaatcccgttcatttacgcctccagcgccgctact
tacggtgccgatttaaccttcaaggaagaattggcttatgaaggtccgctgaatgtctac
ggttattccaagtttcagttcgaccaatatttgcgcagacagcaaaaattgaccgcgcaa
gtggtgggtttacgctacttcaatgtctacggtccgcgcgaagcccacaaaggtagcatg
gccagcgtagcctttcatttgaataatcagatcaaagattccgacgaattacgcttattc
gaaggttgcgacggttacggcaacggcgagcagcgccgcgattttgtttatgtcggcgat
gtggtggctattaacctttggtttctggataacccccaagcatccggcatctacaactgt
ggcacgggtcgtagccagacctttaatgatgtggcgaatgcggtgatcaaatttcaccag
cgcggccatatcaaatatattcccttccccgagcacctgaaaggctgctaccaaagcttc
accgaagccaatctggataaattacgcgccgctggttgtaaacattcgttccaaaccgtc
gagcaaggcgtacaactttatatggaatggttgaacggctag
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