Methylomonas sp. EFPC1: JWZ98_07475
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Entry
JWZ98_07475 CDS
T10319
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
meep Methylomonas sp. EFPC1
Brite
KEGG Orthology (KO) [BR:
meep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
meep03016
]
JWZ98_07475 (truB)
Enzymes [BR:
meep01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
JWZ98_07475 (truB)
Transfer RNA biogenesis [BR:
meep03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JWZ98_07475 (truB)
Prokaryotic type
JWZ98_07475 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
QSB02767
LinkDB
All DBs
Position
1580222..1581139
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AA seq
305 aa
AA seq
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MAKRKSGRDVHGIVLLDKRLGVSSNQALQEVRRLFNANKAGHTGALDPLATGLLPLCFGE
ATKVSALMLDDDKRYQVTIQLGVMTDTGDSEGKIVAEMPVPALDGVQLQACLQHFTGPIE
QVPPMYSALKHQGKKLYELAREGKTVDRQPRAITIYELQLLNFDAELGQLTLDVFCSKGT
YIRSLAEDIGHRLGTCGTVTALRRTKAGMFDLEQAYTLQQLQAMGFAELQNTLIELDVPL
KAIPEVSLSTEQAEKIKLGQRIAFNGGMAGQVRIYSPQAFLGLGEILLDGKLAPKKLFHL
EDQTT
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacgtaagtccgggcgcgatgtgcacggcatcgtgctgctcgacaaacgttta
ggcgtatcgtccaatcaggccttgcaggaagtcaggcgattatttaatgccaacaaggcc
gggcataccggggcgctggatcctcttgctaccggtttgttacccttgtgcttcggtgag
gcgaccaaggtctcggcattgatgctggatgacgataagcgttatcaggtaacgatacaa
ctgggcgtgatgaccgataccggcgatagcgaaggtaaaatcgtcgccgaaatgccggtg
ccagccctggatggcgtgcagttgcaagcttgtttgcagcatttcaccgggccgatcgag
caggtgccgcctatgtattcggcgctcaagcatcaaggcaagaagttgtacgagttggct
agggaaggcaaaaccgtggaccgtcagcccagggccatcactatttatgaattgcagctg
ttaaatttcgatgccgaattggggcaattgacgctggatgtattttgctctaagggtact
tatattcgttcgctggcggaagatattggtcacaggttagggacctgcggcacggtaact
gcgttacgcagaaccaaggcgggtatgttcgatctggagcaagcttatactttgcagcag
ttgcaggctatgggctttgcagaattgcagaataccttaatcgaactggatgtacccctg
aaggcgatcccggaggtatctttgtctactgagcaggccgaaaaaatcaagcttggtcag
cgcatagcctttaacggcggtatggccggccaggtcagaatatactcgccgcaggccttt
ttggggttgggagaaattctattggatggtaaactagcgccgaaaaaactatttcatttg
gaagatcaaacaacttga
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